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ResearchFormerly WizWand

CPTAC

Benchmarks

TaskDatasetSOTA resultTrendResults

Few-shot classification

CPTAC k=25 positive samples (test)

98.1LUNG ST Accuracy

45

Few-shot Classification

CPTAC

97.8LUNG ST Accuracy

45

Computational Pathology Classification

CPTAC k=10 (test)

92.9LUNG ST

30

CPTAC k=5 positive samples

91.7Lung ST Performance

30

Survival Prediction

CPTAC External (test)

65.18C-Index

27

Multi-cancer Classification

CPTAC Aggregate

50.2Avg F1 Score

23

CPTAC NSCLC

99.5AUPRC

23

Pathology Multiple Instance Learning (MIL) Classification

CPTAC external aggregated 23 tasks

71.8AUC

19

CPTAC 9x magnification (test)

99.4ST (NSCLC) Accuracy

19

CPTAC

99NSCLC ST Accuracy

19

CPTAC-LUAD

0.861AUC

18

CPTAC-CRC

89.9AUC

18

Gene Mutation Prediction

CPTAC

0.658BRCA PIK3CA AUC

15

Few shot performance comparison (Balanced accuracy score)

CPTAC k=10 (test)

92.9LUNG ST Balanced Accuracy

15

Molecular Profile Prediction

CPTAC (test)

98LUNG ST Prediction Score

15

Few-shot Classification

CPTAC (k=10 samples)

97.8LUNG ST Performance

15

Few-shot Biomarker and Subtype Prediction

CPTAC TCGA-trained few-shot (k=25) (test)

98.3Lung ST Score

15

CPTAC 1.0 (k=25)

93.4LUNG ST

15

Few-shot classification

CPTAC k=5 positive samples (test)

96.8LUNG ST Score

15

Computational Pathology Classification

CPTAC k=25 (test)

93.4Accuracy (LUNG ST)

15

Few-shot Classification

CPTAC (test)

93.4LUNG ST Performance

15

Molecular Profile Prediction

CPTAC

98.3LUNG ST Accuracy

15

Molecular Profile Prediction

CPTAC

98LUAD ST Score

15

Few-shot Classification

CPTAC Few-shot k=5 TCGA features (test)

96.8Lung ST Score

15

Few-shot tissue subtyping and mutation prediction

CPTAC k=10 positive samples (test)

92.8LUNG-ST

15