Few-shot Classification on CPTAC
97.8LUNG ST AccuracyPRISM
Evaluation results
| Method | Links | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PRISMk=102024.11 | 97.8 | 74.9 | 63 | 70.9 | 77 | 72.5 | 58.7 | 74.4 | 62 | 51.5 | 70.3 | |
| PRISMk=52024.11 | 96.9 | 70.2 | 59 | 65.6 | 73 | 66.3 | 57.1 | 71.2 | 58.6 | 52.1 | 67 | |
| PRISMk=5, Aggregation=Weighted integration (Eq. 8)2024.11 | 96.9 | 70.2 | 59 | 65.6 | 73 | 66.3 | 57.1 | 71.2 | 58.6 | 52.1 | 67 | |
| COBRA-H0k=10, Backbone=H-Optimus-02024.11 | 92.7 | 78.8 | 72.6 | 67.5 | 75.5 | 59.4 | 54 | 82.6 | 67.5 | 52.4 | 70.3 | |
| COBRA-UNIk=10, Backbone=UNI2024.11 | 91 | 73.5 | 69.7 | 69.4 | 77.1 | 63.6 | 58.2 | 78.9 | 70.6 | 51.9 | 70.4 | |
| COBRA-V2k=10, Backbone=Virchow-22024.11 | 90.7 | 71.4 | 69.3 | 68.8 | 78.2 | 64.4 | 62.7 | 85.3 | 76.6 | 53.2 | 72.1 | |
| MADELEINEk=102024.11 | 90 | 64.9 | 60.9 | 61.2 | 74.5 | 64.7 | 63 | 71 | 60.2 | 54 | 66.4 | |
| COBRA-H0k=5, Backbone=H-Optimus-02024.11 | 88.6 | 74 | 68.4 | 60.5 | 64.9 | 54.3 | 52.8 | 78.8 | 61.7 | 51.3 | 65.5 | |
| COBRA-H0k=5, Aggregation=Weighted integration (Eq. 8), Backbone=H-Optimus-02024.11 | 88.6 | 74 | 68.4 | 60.5 | 64.9 | 54.3 | 52.8 | 78.8 | 61.7 | 51.3 | 65.5 | |
| MADELEINEk=52024.11 | 87.8 | 63.2 | 59.5 | 54.7 | 62.6 | 62.5 | 59.3 | 68.3 | 56.4 | 52.2 | 62.6 | |
| MADELEINEk=5, Aggregation=Weighted integration (Eq. 8)2024.11 | 87.8 | 63.2 | 59.5 | 54.7 | 62.6 | 62.5 | 59.3 | 68.3 | 56.4 | 52.2 | 62.6 | |
| COBRA-V2k=5, Backbone=Virchow-22024.11 | 86.7 | 66.9 | 63.4 | 59.4 | 71.7 | 64.9 | 59.8 | 82.2 | 66.6 | 51 | 67.3 | |
| COBRA-V2k=5, Aggregation=Weighted integration (Eq. 8), Backbone=Virchow-22024.11 | 86.7 | 66.9 | 63.4 | 59.4 | 71.7 | 64.9 | 59.8 | 82.2 | 66.6 | 51 | 67.3 | |
| COBRA-UNIk=5, Backbone=UNI2024.11 | 86.5 | 71.8 | 62.8 | 60.8 | 66.4 | 61.7 | 57.5 | 71.7 | 61.5 | 49.1 | 65 | |
| COBRA-UNIk=5, Aggregation=Weighted integration (Eq. 8), Backbone=UNI2024.11 | 86.5 | 71.8 | 62.8 | 60.8 | 66.4 | 61.7 | 57.5 | 71.7 | 61.5 | 49.1 | 65 | |
| CONCHk=102024.11 | 85.8 | 60.9 | 59.1 | 60.6 | 73.9 | 66.9 | 53.6 | 68.1 | 61.8 | 55.4 | 64.6 | |
| CONCHk=52024.11 | 83.1 | 61.8 | 56.8 | 54.8 | 60.5 | 64.8 | 54 | 51.8 | 66.2 | 55 | 60.7 | |
| CONCHk=5, Aggregation=Mean over patch embeddings, Backbone=CONCH2024.11 | 83.1 | 61.8 | 56.8 | 54.8 | 60.5 | 64.8 | 54 | 66.2 | 55 | 52.3 | 60.7 | |
| COBRA-CTPk=10, Backbone=CTransPath2024.11 | 82.1 | 67 | 60.9 | 64.1 | 67.2 | 61 | 54.3 | 71.3 | 61.7 | 47.7 | 63.7 | |
| GigaPathk=102024.11 | 78.7 | 59.6 | 65.2 | 59.7 | 72.1 | 62.6 | 56.6 | 78.1 | 65.2 | 53.7 | 65.2 | |
| COBRA-CTPk=5, Backbone=CTransPath2024.11 | 77.5 | 62 | 59.9 | 60.6 | 61.7 | 60.2 | 51.8 | 61.7 | 53.2 | 47.7 | 59.6 | |
| COBRA-CTPk=5, Aggregation=Weighted integration (Eq. 8), Backbone=CTransPath2024.11 | 77.5 | 62 | 59.9 | 60.6 | 61.7 | 60.2 | 51.8 | 61.7 | 53.2 | 47.7 | 59.6 | |
| Virchow-2k=102024.11 | 76.5 | 60.2 | 64.1 | 59.2 | 76 | 67.4 | 59.4 | 82.6 | 70 | 54.6 | 67 | |
| CHIEFk=102024.11 | 76.2 | 65 | 60.2 | 58.2 | 70.8 | 68.9 | 56.6 | 71.8 | 57.9 | 50.1 | 63.6 | |
| Virchowk=102024.11 | 75.9 | 62.7 | 56.7 | 56.4 | 59.6 | 58.9 | 48.6 | 62.6 | 53.5 | 50.5 | 58.5 | |
| H-Optimusk=102024.11 | 74.6 | 66.8 | 63.5 | 57.9 | 71.6 | 59.8 | 51.1 | 77.7 | 62.5 | 53.8 | 63.9 | |
| CHIEFk=52024.11 | 73.5 | 60.9 | 58.7 | 54.6 | 63.1 | 66.6 | 53.7 | 64.2 | 49.8 | 48.7 | 59.4 | |
| CHIEFk=52024.11 | 73.5 | 60.9 | 58.7 | 54.6 | 63.1 | 66.6 | 53.7 | 64.2 | 49.8 | 48.7 | 59.4 | |
| UNIk=102024.11 | 73.4 | 63.3 | 62.9 | 60.9 | 70.6 | 66.4 | 55.6 | 76.3 | 63.5 | 54.2 | 64.7 | |
| Virchow-2k=52024.11 | 72.4 | 61.1 | 62.6 | 52.6 | 65.6 | 62.2 | 56.9 | 78 | 59.7 | 53.3 | 62.4 | |
| Virchow2k=5, Aggregation=Mean over patch embeddings, Backbone=Virchow-22024.11 | 72.4 | 61.1 | 62.6 | 52.6 | 65.6 | 62.2 | 56.9 | 78 | 59.7 | 53.3 | 62.4 | |
| Virchowk=52024.11 | 72.3 | 60.8 | 56.5 | 51.1 | 53.9 | 49.1 | 48.3 | 52.8 | 50.3 | 50.2 | 54.5 | |
| Virchowk=5, Aggregation=Mean over patch embeddings, Backbone=Virchow2024.11 | 72.3 | 60.8 | 56.5 | 51.1 | 53.9 | 49.1 | 48.3 | 52.8 | 50.3 | 50.2 | 54.5 | |
| GigaPathk=52024.11 | 71.6 | 58.1 | 62.9 | 54.1 | 63.3 | 58.5 | 53.2 | 69.9 | 56.8 | 52.6 | 60.1 | |
| GigaPathk=5, Aggregation=Mean over patch embeddings, Backbone=GigaPath2024.11 | 71.6 | 58.1 | 62.9 | 54.1 | 63.3 | 58.5 | 53.2 | 69.9 | 56.8 | 52.6 | 60.1 | |
| GigaPath-SEk=10, Encoder=Slide Encoder2024.11 | 71.4 | 60 | 61 | 57.6 | 62.1 | 57.7 | 53.8 | 55.2 | 56.8 | 48.9 | 58.5 | |
| H-Optimusk=52024.11 | 68.6 | 63.9 | 63.3 | 51.3 | 69.1 | 51.1 | 48.1 | 71.9 | 55.9 | 51.6 | 58.8 | |
| H-Optimusk=5, Aggregation=Mean over patch embeddings, Backbone=H-Optimus-02024.11 | 68.6 | 63.9 | 63.3 | 51.3 | 62.1 | 51.1 | 48.1 | 71.9 | 55.9 | 51.6 | 58.8 | |
| UNIk=52024.11 | 67.8 | 60.8 | 60.3 | 53.3 | 61.9 | 59.8 | 53.6 | 67.4 | 53.8 | 50.7 | 58.9 | |
| UNIk=5, Aggregation=Mean over patch embeddings, Backbone=UNI2024.11 | 67.8 | 60.8 | 60.3 | 53.3 | 61.9 | 59.8 | 53.6 | 67.4 | 53.8 | 50.7 | 58.9 | |
| GigaPath-SEk=5, Encoder=Slide Encoder2024.11 | 65.2 | 57.2 | 58.3 | 52.5 | 58.4 | 54 | 53.7 | 54.4 | 51.1 | 47.2 | 55.2 | |
| GigaPath-SEk=5, Architecture=Slide Encoder, Aggregation=Weighted integration (Eq. 8)2024.11 | 65.2 | 57.2 | 58.3 | 52.5 | 58.4 | 51 | 53.7 | 54.4 | 51.1 | 47.2 | 55.2 | |
| CTransPathk=52024.11 | 64.1 | 55.6 | 56.6 | 50.6 | 58.2 | 58.9 | 49.3 | 59.4 | 47.8 | 49.7 | 55 | |
| CTransPathk=5, Aggregation=Mean over patch embeddings, Backbone=CTransPath2024.11 | 64.1 | 55.6 | 56.6 | 50.6 | 58.2 | 58.9 | 49.3 | 59.4 | 47.8 | 49.7 | 55 | |
| CTransPathk=102024.11 | 63.8 | 55.9 | 56.1 | 53.9 | 66 | 60.9 | 49.7 | 66.6 | 54.6 | 50.4 | 57.8 |