Few-shot tissue subtyping and mutation prediction on CPTAC k=10 positive samples (test)
92.8LUNG-STPRISM
Evaluation results
| Method | Links | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PRISMk=10, training_source=TCGA2024.11 | 92.8 | 40.1 | 52.4 | 56.3 | 69.6 | 52.6 | 17.2 | 48 | 24.3 | 41.6 | 49.6 | |
| MADELEINEk=10, training_source=TCGA2024.11 | 80.2 | 31.9 | 44.2 | 46.5 | 56.9 | 29.9 | 22.7 | 40.3 | 24.7 | 47.7 | 42.5 | |
| COBRA-V2k=10, training_source=TCGA, backbone=Virchow-22024.11 | 80 | 37.2 | 50.3 | 48.2 | 67.1 | 45.4 | 19.8 | 44.8 | 26.8 | 41.3 | 46.1 | |
| COBRA-H0k=10, training_source=TCGA, backbone=H-Optimus-02024.11 | 78.9 | 42.9 | 48.6 | 39.3 | 54.8 | 49.4 | 11.8 | 41.7 | 22.8 | 45 | 43.5 | |
| COBRA-UNIk=10, training_source=TCGA, backbone=UNI2024.11 | 75.5 | 38.5 | 49.9 | 40.2 | 59.6 | 54.1 | 12.8 | 42.1 | 28.1 | 41.1 | 44.2 | |
| CONCHk=10, training_source=TCGA2024.11 | 72.8 | 31.3 | 42.5 | 44.1 | 51.7 | 49 | 17.8 | 40 | 26.6 | 48.4 | 42.4 | |
| COBRA-CTPk=10, training_source=TCGA, backbone=CTransPath2024.11 | 72.5 | 34 | 47.4 | 38.8 | 67 | 58.1 | 13 | 39.3 | 25.3 | 40.4 | 43.6 | |
| CHIEFk=10, training_source=TCGA2024.11 | 67.8 | 32.7 | 44.3 | 35.7 | 64.5 | 48.7 | 14.9 | 41.5 | 24.3 | 40.1 | 41.5 | |
| Virchow-2k=10, training_source=TCGA2024.11 | 62.4 | 25.9 | 45.6 | 42 | 72.9 | 52.2 | 18.4 | 41.4 | 22.3 | 37.9 | 42.1 | |
| GigaPath-SEk=10, training_source=TCGA, Slide Encoder=true2024.11 | 60.8 | 25.4 | 44.2 | 46.1 | 57.6 | 47.7 | 15.5 | 34 | 21.7 | 57.3 | 41 | |
| GigaPathk=10, training_source=TCGA2024.11 | 59.3 | 19.9 | 47.7 | 38.4 | 65 | 54.5 | 13.9 | 41.4 | 25.9 | 53.9 | 41.9 | |
| Virchowk=10, training_source=TCGA2024.11 | 58.5 | 22.2 | 32.4 | 28.6 | 53.9 | 57.9 | 13.8 | 39.6 | 23.6 | 48.4 | 37.9 | |
| CTransPathk=10, training_source=TCGA2024.11 | 58 | 24.9 | 41.1 | 24.9 | 54.4 | 53.9 | 12.3 | 40.6 | 24.5 | 39.9 | 37.5 | |
| H-Optimus-0k=10, training_source=TCGA2024.11 | 57.7 | 28.7 | 39.4 | 28.9 | 70.4 | 49.6 | 10.7 | 40.4 | 21.9 | 41.6 | 38.9 | |
| UNIk=10, training_source=TCGA2024.11 | 55.8 | 23 | 42.7 | 33.1 | 62.3 | 58.4 | 13.2 | 42.1 | 22.8 | 40.3 | 39.4 |