Few-shot Biomarker and Subtype Prediction on CPTAC k=25 (TCGA-trained, test) benchmark leaderboard · SOTA2 Research

Few-shot Biomarker and Subtype Prediction on CPTAC k=25 (TCGA-trained, test)

98.3Lung ST ScorePRISM

Evaluation Results

Method	Links
PRISM2024.11		98.3	—	45.9	54	69.6	86.9	75.1	17.9	53	25.8	57.4	58.4
COBRA-H02024.11		96	—	41.8	63.8	71.5	85.9	68.8	17.1	79	38.9	59.7	62.2
COBRA-UNI2024.11		95	—	32.5	57.8	74.5	86.2	72.6	18.9	67.8	36.3	58.8	60
COBRA-V22024.11		94.4	—	34.5	59.2	72.6	89.7	72.2	24	75	43.2	59.6	62.4
MADELEINE2024.11		94.1	—	34.1	50.7	69.2	86.7	72.6	24.1	57.5	29.5	61.4	58
CONCH2024.11		92	—	35.6	47.5	67	85.7	72.7	17.1	56.2	30.8	60.9	56.5
COBRA-CTP2024.11		90.2	—	31.6	53.1	70.7	83.2	71.1	16.7	64.5	34.9	54	57
CHIEF2024.11		85.2	—	30.9	52.2	67.3	83.8	76.3	16.6	58.6	29.9	54.9	55.6
Virchow22024.11		84.9	—	30.2	54.3	64.6	88.5	72.5	22.3	72.8	32.8	61.2	58.4
GigaPath2024.11		83.7	—	27.5	59.3	64	85.3	69.2	18.9	66	33.7	59.9	56.8
H-Optimus2024.11		83	—	34.4	57	63.5	85.4	66.2	16.1	70.9	34.4	62	57.3
UNI2024.11		81.1	—	26.4	53.5	66.1	83.6	70.2	18	64.2	30	60.9	55.4
Virchow2024.11		80.6	—	30.2	47.8	62.5	75.8	65.9	16.6	48.7	24.7	57	51
GigaPath-SE2024.11		80.1	—	25.4	46.2	63.2	70.9	66.6	17.9	38.2	23	54	48.5
CTransPath2024.11		72.9	—	25.4	44.5	63.1	79.6	70.5	13.3	57.8	31.2	57.1	51.5