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Papers Benchmarks Datasets Tasks

CPTAC dataset and benchmarks – Page 2 · SOTA2 Research

Research Datasets

CPTAC

Benchmarks

Task NameDataset NameSOTA MethodSort

Task NameDataset NameSOTA ResultTrendResults

Whole-slide image visual-question answering

CPTAC

74.95Accuracy

14

Slide-level Clinical and Molecular Marker Prediction

CPTAC external validation cohorts (test)

99.2NSCLC Subtyping AUROC

14

Subtyping prediction

CPTAC TCGA-NSCLC 2 classes (external test)

90.6Balanced Accuracy

14

Molecular and Clinical Classification

CPTAC COAD

95.9AUROC

11

Slide-level classification

CPTAC

72.7F1 Score

10

Survival Prediction

CPTAC UCEC (external val)

0.702C-index

9

Survival Prediction

CPTAC-LUAD (external val)

0.663C-index

9

STK11 mutation status prediction

CPTAC-LUAD-STK11

71.7Accuracy

8

KRAS mutation status prediction

CPTAC-LUAD-KRAS

68.1Accuracy

8

Cross-domain survival prediction

CPTAC UCEC

0.682C-index

5

Visual Question Answering

CPTAC NSCLC

75.4Score

4

Genome-wide RNA-Seq Prediction

CPTAC-LUAD

0.362PCC (T1000)

3

NSCLC subtyping

CPTAC-NSCLC

86Accuracy

3

PAM50 subtype classification

CPTAC-BRCA

80.2Accuracy

2

General Slide Classification

CPTAC Combined

0.64Average AUPRC

2

Molecular Classification

CPTAC BRCA

94.8ESR1

2

Molecular Classification

CPTAC LUAD

46.7STK11 Accuracy

2

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Popular tasks

Few-shot classification Classification Survival Prediction Molecular Profile Prediction Molecular Classification

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