Few-shot Classification on CPTAC (k=10 samples)
97.8LUNG ST PerformancePRISM
Evaluation Results
| Method | Links | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PRISMk-shot=10, aggregation=mean over patch embeddings, training=TCGA2024.11 | 97.8 | 74.9 | 63 | 70.9 | 77 | 72.5 | 58.7 | 74.4 | 62 | 51.5 | 70.3 | |
| COBRA-H0k-shot=10, aggregation=multi-FM weighting vector, backbone=H-Optimus-0, training=TCGA2024.11 | 92.7 | 78.8 | 72.6 | 67.5 | 75.5 | 59.4 | 54 | 82.6 | 67.5 | 52.4 | 70.3 | |
| COBRA-UNIk-shot=10, aggregation=multi-FM weighting vector, backbone=UNI, training=TCGA2024.11 | 91 | 73.5 | 69.7 | 69.4 | 77.1 | 63.6 | 58.2 | 78.9 | 70.6 | 51.9 | 70.4 | |
| COBRA-V2k-shot=10, aggregation=multi-FM weighting vector, backbone=Virchow-2, training=TCGA2024.11 | 90.7 | 71.4 | 69.3 | 68.8 | 78.2 | 64.4 | 62.7 | 85.3 | 76.6 | 53.2 | 72.1 | |
| MADELEINEk-shot=10, aggregation=mean over patch embeddings, training=TCGA2024.11 | 90 | 64.9 | 60.9 | 61.2 | 74.5 | 64.7 | 63 | 71 | 60.2 | 54 | 66.4 | |
| CONCHk-shot=10, aggregation=mean over patch embeddings, training=TCGA2024.11 | 85.8 | 60.9 | 59.1 | 60.6 | 73.9 | 66.9 | 53.6 | 68.1 | 61.8 | 55.4 | 64.6 | |
| COBRA-CTPk-shot=10, aggregation=multi-FM weighting vector, backbone=CTransPath, training=TCGA2024.11 | 82.1 | 67 | 60.9 | 64.1 | 67.2 | 61 | 54.3 | 71.3 | 61.7 | 47.7 | 63.7 | |
| GigaPathk-shot=10, aggregation=mean over patch embeddings, training=TCGA2024.11 | 78.7 | 59.6 | 65.2 | 59.7 | 72.1 | 62.6 | 56.6 | 78.1 | 65.2 | 53.7 | 65.2 | |
| Virchow2k-shot=10, aggregation=mean over patch embeddings, training=TCGA2024.11 | 76.5 | 60.2 | 64.1 | 59.2 | 76 | 67.4 | 59.4 | 82.6 | 70 | 54.6 | 67 | |
| CHIEFk-shot=10, aggregation=mean over patch embeddings, training=TCGA2024.11 | 76.2 | 65 | 60.2 | 58.2 | 70.8 | 68.9 | 56.6 | 71.8 | 57.9 | 50.1 | 63.6 | |
| Virchowk-shot=10, aggregation=mean over patch embeddings, training=TCGA2024.11 | 75.9 | 62.7 | 56.7 | 56.4 | 59.6 | 58.8 | 48.6 | 62.6 | 53.5 | 50.5 | 58.5 | |
| H-Optimusk-shot=10, aggregation=mean over patch embeddings, training=TCGA2024.11 | 74.6 | 66.8 | 63.5 | 57.9 | 71.6 | 59.8 | 51.1 | 77.7 | 62.5 | 53.8 | 63.9 | |
| UNIk-shot=10, aggregation=mean over patch embeddings, training=TCGA2024.11 | 73.4 | 63.3 | 62.9 | 60.9 | 70.6 | 66.4 | 55.6 | 76.3 | 63.5 | 54.2 | 64.7 | |
| GigaPath-SEk-shot=10, aggregation=Slide Encoder, training=TCGA2024.11 | 71.4 | 60 | 61 | 57.6 | 62.1 | 57.7 | 53.8 | 55.2 | 56.8 | 48.9 | 58.5 | |
| CTransPathk-shot=10, aggregation=mean over patch embeddings, training=TCGA2024.11 | 63.8 | 55.9 | 56.1 | 53.9 | 66 | 60.9 | 49.7 | 66.6 | 54.6 | 50.4 | 57.8 |