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ResearchFormerly WizWand

Metal Ion Binding Prediction on Metal Ion

82.4ROC-AUCAll-pos MLM+JEPA
51.92859.83967.7575.661May 8, 2026
Updated 5mo ago

Evaluation results

MethodLinks
All-pos MLM+JEPABackbone=ESM2-150M2026.0582.4
BaselineBackbone=AMPLIFY-120M2026.0581.2
Masked-posBackbone=AMPLIFY-120M2026.0580.9
Masked-pos (run 2)Backbone=ESM2-150M2026.0580.5
MLM-onlyBackbone=AMPLIFY-120M2026.0580.3
Masked-pos (run 1)Backbone=ESM2-150M2026.0580.1
All-pos MLM+JEPABackbone=AMPLIFY-120M2026.0579.9
MLM-onlyBackbone=ESM2-150M2026.0579.6
BaselineBackbone=ESM2-150M2026.0579.3
BaselineBackbone=ESM2-35M2026.0579
EMA (4h)Backbone=ESM2-150M2026.0578.5
Masked-pos (SGDm)Backbone=ESM2-35M2026.0578
Masked-pos (AdamW)Backbone=ESM2-35M2026.0577.5
MLM-onlyBackbone=ESM2-35M2026.0576.8
MLM+JEPA @90kBackbone=Not specified2026.0576.5
Masked-posBackbone=ProteinBERT2-35M2026.0574.8
MLM-onlyBackbone=Rand-Init-35M2026.0573.3
ProteinBERT2-150M masked-posBackbone=Not specified2026.0572.4
Masked-posBackbone=Rand-Init-35M2026.0571.1
All-pos MLM+JEPABackbone=ESM2-35M2026.0570.6
BaselineBackbone=ProteinBERT2-35M2026.0566.1
MLM-onlyBackbone=ProteinBERT2-35M2026.0565.8
BaselineBackbone=Rand-Init-35M2026.0565
All-pos MLM+JEPABackbone=Rand-Init-35M2026.0562.6
All-pos MLM+JEPABackbone=ProteinBERT2-35M2026.0562.6
JEPA-only @90kBackbone=Not specified2026.0560.9
JEPA-onlyBackbone=ESM2-150M2026.0560.5
ESM2-150M rand-init MLM-onlyBackbone=Not specified2026.0560.2
JEPA-onlyBackbone=Rand-Init-35M2026.0559.4
JEPA-onlyBackbone=ESM2-35M2026.0558
JEPA-onlyBackbone=AMPLIFY-120M2026.0556.4
JEPA-onlyBackbone=ProteinBERT2-35M2026.0553.1