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ResearchFormerly WizWand

Disorder Prediction on CheZoD

0.702Spearman CorrelationESM2-35M Masked-pos (AdamW)
0.027040.202270.37750.55273May 8, 2026
Updated 5mo ago

Evaluation results

MethodLinks
ESM2-35M Masked-pos (AdamW)Backbone=ESM2-35M, Objective=Masked-pos (AdamW)2026.050.702
ESM2-35M BaselineBackbone=ESM2-35M, Objective=Baseline2026.050.687
ESM2-150M BaselineBackbone=ESM2-150M, Objective=Baseline2026.050.686
ProteinBERT2-35M Masked-posBackbone=ProteinBERT2-35M, Objective=Masked-pos2026.050.676
Rand-Init-35M MLM-onlyBackbone=Rand-Init-35M, Objective=MLM-only2026.050.675
ESM2-150M Masked-pos (run 2)Backbone=ESM2-150M, Objective=Masked-pos (run 2)2026.050.673
ESM2-150M EMA (4h) EMABackbone=ESM2-150M EMA (4h), Objective=EMA2026.050.673
ProteinBERT2-150M masked-posBackbone=-, Objective=ProteinBERT2-150M masked-pos2026.050.672
Rand-Init-35M Masked-posBackbone=Rand-Init-35M, Objective=Masked-pos2026.050.671
AMPLIFY-120M Masked-posBackbone=AMPLIFY-120M, Objective=Masked-pos2026.050.67
ESM2-35M Masked-pos (SGDm)Backbone=ESM2-35M, Objective=Masked-pos (SGDm)2026.050.666
MLM+JEPA @90kBackbone=-, Objective=MLM+JEPA @90k2026.050.666
ESM2-35M MLM-onlyBackbone=ESM2-35M, Objective=MLM-only2026.050.656
ESM2-150M Masked-pos (run 1)Backbone=ESM2-150M, Objective=Masked-pos (run 1)2026.050.654
ESM2-150M MLM-onlyBackbone=ESM2-150M, Objective=MLM-only2026.050.632
AMPLIFY-120M BaselineBackbone=AMPLIFY-120M, Objective=Baseline2026.050.63
AMPLIFY-120M MLM-onlyBackbone=AMPLIFY-120M, Objective=MLM-only2026.050.617
ProteinBERT2-35M All-pos MLM+JEPABackbone=ProteinBERT2-35M, Objective=All-pos MLM+JEPA2026.050.609
ESM2-150M All-pos MLM+JEPABackbone=ESM2-150M, Objective=All-pos MLM+JEPA2026.050.605
AMPLIFY-120M All-pos MLM+JEPABackbone=AMPLIFY-120M, Objective=All-pos MLM+JEPA2026.050.6
Rand-Init-35M BaselineBackbone=Rand-Init-35M, Objective=Baseline2026.050.598
ESM2-150M rand-init MLM-onlyBackbone=-, Objective=ESM2-150M rand-init MLM-only2026.050.573
JEPA-only @90kBackbone=-, Objective=JEPA-only @90k2026.050.543
Rand-Init-35M All-pos MLM+JEPABackbone=Rand-Init-35M, Objective=All-pos MLM+JEPA2026.050.521
ESM2-35M All-pos MLM+JEPABackbone=ESM2-35M, Objective=All-pos MLM+JEPA2026.050.492
Rand-Init-35M JEPA-onlyBackbone=Rand-Init-35M, Objective=JEPA-only2026.050.484
ProteinBERT2-35M MLM-onlyBackbone=ProteinBERT2-35M, Objective=MLM-only2026.050.436
ProteinBERT2-35M BaselineBackbone=ProteinBERT2-35M, Objective=Baseline2026.050.405
ESM2-150M JEPA-onlyBackbone=ESM2-150M, Objective=JEPA-only2026.050.297
AMPLIFY-120M JEPA-onlyBackbone=AMPLIFY-120M, Objective=JEPA-only2026.050.241
ESM2-35M JEPA-onlyBackbone=ESM2-35M, Objective=JEPA-only2026.050.161
ProteinBERT2-35M JEPA-onlyBackbone=ProteinBERT2-35M, Objective=JEPA-only2026.050.053