Phenotype Concept Recognition on ID-68 (test)
93.36PrecisionPhenoBERT
Evaluation results
| Method | Links | ||||
|---|---|---|---|---|---|
| PhenoBERTMethod Category=Neural2025.07 | 93.36 | 78.76 | 85.44 | 1 | |
| AutoPCRFTMethod Category=Prompt-Based, Fine-tuning=true2025.07 | 87.84 | 77.01 | 82.07 | — | |
| FastHPOCRMethod Category=Dictionary-Based2025.07 | 87.23 | 71.76 | 78.75 | 3 | |
| NCBOMethod Category=Dictionary-Based2025.07 | 86.27 | 65.23 | 74.29 | 7 | |
| PhenoTaggerMethod Category=Neural2025.07 | 84.4 | 72.58 | 78.04 | 5 | |
| AutoPCRMethod Category=Prompt-Based, LLM Backend=GPT-4o-mini2025.07 | 83.68 | 76.59 | 79.98 | 2 | |
| OBOMethod Category=Dictionary-Based2025.07 | 81.41 | 60.79 | 69.61 | 9 | |
| PhenoTagger++Method Category=Neural2025.07 | 79.9 | 72.81 | 76.19 | 6 | |
| NCRMethod Category=Neural2025.07 | 78.64 | 78.18 | 78.41 | 4 | |
| REALMethod Category=Prompt-Based, LLM Backend=GPT-4o-mini2025.07 | 76.33 | 65.46 | 70.48 | 8 | |
| ClinPhenMethod Category=Dictionary-Based2025.07 | 72.92 | 60.33 | 66.03 | 10 | |
| VanillaMethod Category=Prompt-Based, LLM Backend=GPT-4o-mini2025.07 | 18.29 | 11.2 | 13.89 | 11 |