Phenotype Concept Recognition on GSC 2024 (test)
95.71Precision (P)NCBO
Evaluation results
| Method | Links | ||||
|---|---|---|---|---|---|
| NCBOMethod Category=Dictionary-Based2025.07 | 95.71 | 51.57 | 67.03 | 7 | |
| AutoPCRFTMethod Category=Prompt-Based, Fine-tuning=true2025.07 | 89.08 | 77.94 | 83.14 | — | |
| FastHPOCRMethod Category=Dictionary-Based2025.07 | 88.43 | 79.25 | 83.59 | 1 | |
| PhenoTagger++Method Category=Neural2025.07 | 87.71 | 78.22 | 82.69 | 3 | |
| AutoPCRMethod Category=Prompt-Based, LLM Backend=GPT-4o-mini2025.07 | 87.13 | 79.19 | 82.97 | 2 | |
| PhenoTaggerMethod Category=Neural2025.07 | 86.16 | 78.07 | 81.92 | 4 | |
| PhenoBERTMethod Category=Neural2025.07 | 85.9 | 74.88 | 80.01 | 5 | |
| OBOMethod Category=Dictionary-Based2025.07 | 85.89 | 52.66 | 65.29 | 8 | |
| ClinPhenMethod Category=Dictionary-Based2025.07 | 84.1 | 38.74 | 53.05 | 10 | |
| REALMethod Category=Prompt-Based, LLM Backend=GPT-4o-mini2025.07 | 76.19 | 47.35 | 58.4 | 9 | |
| NCRMethod Category=Neural2025.07 | 68.54 | 74.88 | 71.57 | 6 | |
| VanillaMethod Category=Prompt-Based, LLM Backend=GPT-4o-mini2025.07 | 15.31 | 7.57 | 10.13 | 11 |