Biomedical Entity Linking on MM-ST21pv
73.4Acc@1BioBART + ANGEL_FT
Evaluation results
| Method | Links | |
|---|---|---|
| BioBART + ANGEL_FTBackbone=BioBART, Protocol=fine-tuning2024.08 | 73.4 | |
| GenBioEL + ANGEL_PT+FTBackbone=GenBioEL, Protocol=pre-training and fine-tuning2024.08 | 73.3 | |
| Prompt-BioELModel Category=Similarity-based BioEL & Re-ranking2024.08 | 72.6 | |
| KRISSBERTModel Category=Similarity-based BioEL & Re-ranking2024.08 | 72.2 | |
| GenBioEL + ANGEL_FTBackbone=GenBioEL, Protocol=fine-tuning2024.08 | 71.9 | |
| BioBARTSource=reported, Model Category=Generative BioEL2024.08 | 71.8 | |
| BARTSource=reported, Model Category=Generative BioEL2024.08 | 71.5 | |
| BioBARTSource=reproduced, Model Category=Generative BioEL2024.08 | 71.3 | |
| BART + ANGEL_FTBackbone=BART, Protocol=fine-tuning2024.08 | 71.2 | |
| GenBioELSource=reproduced, Model Category=Generative BioEL2024.08 | 70.7 | |
| BARTSource=reproduced, Model Category=Generative BioEL2024.08 | 70.1 | |
| ResCNNModel Category=Similarity-based BioEL & Re-ranking2024.08 | 55 | |
| SapBERTModel Category=Similarity-based BioEL & Re-ranking2024.08 | 50.3 |