# Biomedical Entity Linking on MM-ST21pv Source: [Biomedical Entity Linking on MM-ST21pv]() Collection index: [llms.txt]() Data updated: 2026-02-26T05:26:55.769Z Evaluation of Biomedical Entity Linking performance on the MM-ST21pv dataset, typically measured using Accuracy at 1 (Acc@1). A research result applies to its stated dataset, split, metric and evaluation configuration. Compare like-for-like settings, preserve the metric's unit and direction, and distinguish paper-reported results from independent reproduction. The best result recorded here is not a claim of exhaustive, current global coverage. | Scope | Recorded value | | --- | --- | | Task | Biomedical Entity Linking | | Dataset (including any stated split) | MM-ST21pv | | Metric | Acc@1 | | Unit | PERCENT | | Direction | Higher is better | | Results loaded | 13 of 13 | | Coverage | All results currently returned for this benchmark | Evaluation settings may differ between results. The original papers and recorded configurations are needed to establish comparability. A shared metric name alone does not establish an identical protocol. ## Metrics - [Acc@1](): Higher is better; unit: PERCENT. ## Recorded results | Method | Acc@1 | Result date | Report paper | | --- | --- | --- | --- | | BioBART + ANGEL\_FT | 73.4 | Not recorded | 68fa7a691e209131cea830cc | | GenBioEL + ANGEL\_PT+FT | 73.3 | Not recorded | 68fa7a691e209131cea830cc | | Prompt-BioEL | 72.6 | Not recorded | 68fa7a691e209131cea830cc | | KRISSBERT | 72.2 | Not recorded | 68fa7a691e209131cea830cc | | GenBioEL + ANGEL\_FT | 71.9 | Not recorded | 68fa7a691e209131cea830cc | | BioBART | 71.8 | Not recorded | 68fa7a691e209131cea830cc | | BART | 71.5 | Not recorded | 68fa7a691e209131cea830cc | | BioBART | 71.3 | Not recorded | 68fa7a691e209131cea830cc | | BART + ANGEL\_FT | 71.2 | Not recorded | 68fa7a691e209131cea830cc | | GenBioEL | 70.7 | Not recorded | 68fa7a691e209131cea830cc | | BART | 70.1 | Not recorded | 68fa7a691e209131cea830cc | | ResCNN | 55 | Not recorded | 68fa7a691e209131cea830cc | | SapBERT | 50.3 | Not recorded | 68fa7a691e209131cea830cc | ### BioBART + ANGEL\_FT Acc@1: 73.4. Result ID: 698b773d7a967eddb76ed113. [Reporting paper]() [Method origin paper]() [Implementation]() Recorded evaluation configuration: {"Backbone":"BioBART","Protocol":"fine-tuning"}. This record does not assert independent reproduction. ### GenBioEL + ANGEL\_PT+FT Acc@1: 73.3. Result ID: 698b773d7a967eddb76ed116. [Reporting paper]() [Method origin paper]() [Implementation]() Recorded evaluation configuration: {"Backbone":"GenBioEL","Protocol":"pre-training and fine-tuning"}. This record does not assert independent reproduction. ### Prompt-BioEL Acc@1: 72.6. Result ID: 698b773d7a967eddb76ed10d. [Reporting paper]() Recorded evaluation configuration: {"Model Category":"Similarity-based BioEL & Re-ranking"}. This record does not assert independent reproduction. ### KRISSBERT Acc@1: 72.2. Result ID: 698b773d7a967eddb76ed10c. [Reporting paper]() [Method origin paper]() Recorded evaluation configuration: {"Model Category":"Similarity-based BioEL & Re-ranking"}. This record does not assert independent reproduction. ### GenBioEL + ANGEL\_FT Acc@1: 71.9. Result ID: 698b773d7a967eddb76ed115. [Reporting paper]() [Method origin paper]() [Implementation]() Recorded evaluation configuration: {"Backbone":"GenBioEL","Protocol":"fine-tuning"}. This record does not assert independent reproduction. ### BioBART Acc@1: 71.8. Result ID: 698b773d7a967eddb76ed10f. [Reporting paper]() [Method origin paper]() [Implementation]() Recorded evaluation configuration: {"Source":"reported","Model Category":"Generative BioEL"}. This record does not assert independent reproduction. ### BART Acc@1: 71.5. Result ID: 698b773d7a967eddb76ed10e. [Reporting paper]() [Method origin paper]() Recorded evaluation configuration: {"Source":"reported","Model Category":"Generative BioEL"}. This record does not assert independent reproduction. ### BioBART Acc@1: 71.3. Result ID: 698b773d7a967eddb76ed112. [Reporting paper]() [Method origin paper]() [Implementation]() Recorded evaluation configuration: {"Source":"reproduced","Model Category":"Generative BioEL"}. This record does not assert independent reproduction. ### BART + ANGEL\_FT Acc@1: 71.2. Result ID: 698b773d7a967eddb76ed111. [Reporting paper]() [Method origin paper]() [Implementation]() Recorded evaluation configuration: {"Backbone":"BART","Protocol":"fine-tuning"}. This record does not assert independent reproduction. ### GenBioEL Acc@1: 70.7. Result ID: 698b773d7a967eddb76ed114. [Reporting paper]() [Method origin paper]() Recorded evaluation configuration: {"Source":"reproduced","Model Category":"Generative BioEL"}. This record does not assert independent reproduction. ### BART Acc@1: 70.1. Result ID: 698b773d7a967eddb76ed110. [Reporting paper]() [Method origin paper]() Recorded evaluation configuration: {"Source":"reproduced","Model Category":"Generative BioEL"}. This record does not assert independent reproduction. ### ResCNN Acc@1: 55. Result ID: 698b773d7a967eddb76ed10b. [Reporting paper]() [Method origin paper]() Recorded evaluation configuration: {"Model Category":"Similarity-based BioEL & Re-ranking"}. This record does not assert independent reproduction. ### SapBERT Acc@1: 50.3. Result ID: 698b773d7a967eddb76ed10a. [Reporting paper]() [Method origin paper]() Recorded evaluation configuration: {"Model Category":"Similarity-based BioEL & Re-ranking"}. This record does not assert independent reproduction. Page 1 of 1. This is an index page, not the full collection.