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Sparse regression on Simulated GWAS Mixed LD 50,000 SNPs, 25 significant SNPs (Sample size 100)

242.03Correct IdentificationsPBR
12.522872.1064131.69191.2736Oct 16, 2021

Evaluation results

MethodLinks
PBRHyper-parameter tuning=Out-of-sample Mean Square Error (MSE)2021.10242.0321.24
ENetHyper-parameter tuning=Cross-validation with minimum MSE+1SE2021.10161.4720.35
LassoHyper-parameter tuning=Cross-validation with minimum MSE+1SE2021.1021.3510.68