Gene Ontology term prediction on GO-CC PEER benchmark (test)
0.469AUPRPROTLLM
Evaluation results
| Method | Links | ||
|---|---|---|---|
| PROTLLMPre-training (Protein)=true, Pre-training (Text)=true2024.02 | 0.469 | 0.596 | |
| ProtSTPre-training (Protein)=true, Pre-training (Text)=true2024.02 | 0.364 | 0.487 | |
| DeepFRIPre-training (Protein)=true, Pre-training (Text)=false2024.02 | 0.363 | 0.46 | |
| ESM-2Pre-training (Protein)=true, Pre-training (Text)=false2024.02 | 0.35 | 0.472 | |
| ESM-1bPre-training (Protein)=true, Pre-training (Text)=false2024.02 | 0.324 | 0.477 | |
| OntoProteinPre-training (Protein)=true, Pre-training (Text)=true2024.02 | 0.3 | 0.441 | |
| ProtBertPre-training (Protein)=true, Pre-training (Text)=false2024.02 | 0.234 | 0.408 | |
| GearNetPre-training (Protein)=true, Pre-training (Text)=false2024.02 | 0.226 | 0.486 |