Gene Ontology Term Prediction on Gene Ontology Biological Process (GO-BP) PEER benchmark (test)
0.349AUPRPROTLLM
Evaluation results
| Method | Links | ||
|---|---|---|---|
| PROTLLMPre-training (Protein)=true, Pre-training (Text)=true2024.02 | 0.349 | 0.503 | |
| ProtSTPre-training (Protein)=true, Pre-training (Text)=true2024.02 | 0.342 | 0.482 | |
| ESM-2Pre-training (Protein)=true, Pre-training (Text)=false2024.02 | 0.34 | 0.472 | |
| ESM-1bPre-training (Protein)=true, Pre-training (Text)=false2024.02 | 0.332 | 0.452 | |
| GearNetPre-training (Protein)=true, Pre-training (Text)=false2024.02 | 0.292 | 0.49 | |
| OntoProteinPre-training (Protein)=true, Pre-training (Text)=true2024.02 | 0.284 | 0.436 | |
| DeepFRIPre-training (Protein)=true, Pre-training (Text)=false2024.02 | 0.282 | 0.399 | |
| ProtBertPre-training (Protein)=true, Pre-training (Text)=false2024.02 | 0.188 | 0.279 |