Cell type annotation on Myeloid_b
96.03AccuracyGeneMamba
Evaluation results
| Method | Links | ||
|---|---|---|---|
| GeneMambaEpochs=100, Batch size=5122025.04 | 96.03 | 92.35 | |
| GeneMambaTraining Setup=Supervised fine-tuning with MLP classification head2025.04 | 96.03 | 92.35 | |
| scFoundationTraining Setup=Supervised fine-tuning with MLP classification head2025.04 | 95.74 | 95.69 | |
| GeneFormerTraining Setup=Supervised fine-tuning with MLP classification head2025.04 | 95.4 | 93.8 | |
| scGPTTraining Setup=Supervised fine-tuning with MLP classification head2025.04 | 94.21 | 94.34 | |
| scANVITool=scvi-tools==1.1.0, Latent space dimension=322025.04 | 92.31 | 91.47 | |
| SeuratVersion=R v4.4.0, Reduction=Standard PCA, Backbone=Random Forest2025.04 | 90.18 | 89.3 | |
| HVGSelected Genes=top 2,000 highly variable genes2025.04 | 89.42 | 88.25 | |
| scVITool=scvi-tools==1.1.0, Latent space dimension=322025.04 | 89.29 | 87.8 |