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Protein Structure Generation research benchmarks · SOTA2 Research

Protein Structure Generation

Benchmarks

Dataset NameSOTA MethodSort

Dataset NameSOTA methodMetricTrendResultsLast Updated

Foldseek AFDB clusters DFS (test)

Proteína M_FS^small + Quotient-space diffusion

97.6Designability

20

Apr 24, 2026

CAMEO22 and ATLAS Large > 400 aa (test)

97.95pLDDT

15

May 18, 2026

CAMEO22 and ATLAS Medium 51-400 aa (test)

98.11pLDDT

15

May 18, 2026

CAMEO22 and ATLAS Small <= 50 aa (test)

96.15pLDDT

15

May 18, 2026

701.705FPSD

12

Mar 4, 2026

776.297FPSD

12

Mar 4, 2026

Protein Structure Generation

Ambient Proteins

99.2Designability

10

Feb 26, 2026

Protein backbones

90Fraction within 2Å

7

May 13, 2026

800-residue protein sequences

26.42Clashscore

6

Mar 4, 2026

Protein Sequences 700-residue

21.36Clashscore

6

Mar 4, 2026

Popular datasets

Protein Sequences CAMEO and ATLAS PDB Protein backbones Protein Structure Generation

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