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Sequence-based Affinity Prediction on PEER BindingDB 1.0 (test)

1.03RMSEBioMatrix-4B
1.005241.172371.33951.50663Jun 20, 2026

Evaluation results

MethodLinks
BioMatrix-4B2026.061.03
BioMatrix-1.7B2026.061.284
Literature SOTA2026.061.34
CNN2026.061.497
ProtBertfeature extractor with frozen weights=false2026.061.549
ESM-1bfeature extractor with frozen weights=false2026.061.556
ResNet2026.061.565
Transformer2026.061.566
ESM-1bfeature extractor with frozen weights=true2026.061.571
LSTM2026.061.572
ProtBertfeature extractor with frozen weights=true2026.061.649