Relation Extraction on BLURB RE tasks
77.5ChemProt F1KeBioLM
Evaluation results
| Method | Links | ||||
|---|---|---|---|---|---|
| KeBioLMModel size=base, Fine-tuning=true, Batch Size=16, Maximal input length=256 (ChemProt/DDI), 128 (GAD), Number of runs (seeds)=52021.04 | 77.5 | 81.9 | 84.3 | 81.2 | |
| PubMedBERTModel size=base, Version=abstract2021.04 | 77.2 | 82.4 | 82.3 | 80.6 | |
| BioBERTModel size=base, Version=v1.12021.04 | 76.1 | 80.9 | 80.9 | 79.3 | |
| bio-lmModel size=base, Version=ROBERTa-base-PM-M3-Voc2021.04 | 75.4 | 81 | 82.2 | 79.5 | |
| SciBERTModel size=base, Version=scivocab-uncased2021.04 | 75.2 | 81.1 | 80.9 | 79.1 | |
| ClinicalBERTModel size=base2021.04 | 72 | 78.2 | 78.4 | 76.2 | |
| BlueBERTModel size=base, Version=pubmed-mimic2021.04 | 71.5 | 77.8 | 77.2 | 75.5 |