Protein-protein Interaction Affinity Regression on PEER PPI Affinity 1.0 (test)
2.195RMSEProtBert
Evaluation Results
| Method | Links | |
|---|---|---|
| ProtBertfeature extractor with frozen weights=false2026.06 | 2.195 | |
| ESM-1bfeature extractor with frozen weights=false2026.06 | 2.281 | |
| BioMatrix-4B2026.06 | 2.35 | |
| BioMatrix-1.7B2026.06 | 2.446 | |
| Transformer2026.06 | 2.499 | |
| CNN2026.06 | 2.796 | |
| LSTM2026.06 | 2.853 | |
| DDE2026.06 | 2.908 | |
| Moran2026.06 | 2.984 | |
| ProtBertfeature extractor with frozen weights=true2026.06 | 2.996 | |
| ResNet2026.06 | 3.005 | |
| ESM-1bfeature extractor with frozen weights=true2026.06 | 3.031 |