Perturbation prediction on Tahoe100M

0.806DEOverSCALE

Evaluation results

Method
SCALE2026.03	0.806	—	0.765	—	0.949	0.876	—	—	0.953	0.0002	0.006	—	—	—
STATE2026.03	0.728	—	0.698	—	0.918	0.851	—	—	0.85	0.0006	0.036	—	—	—
PerturbDiff2026.02	0.58	0.893	0.598	0.478	0.641	0.691	61.8	65.8	0.648	0.001	0.017	0.784	0.883	0.903
PerturbDiff2026.02	0.522	0.963	0.572	0.531	0.734	0.445	58.4	62.1	0.686	0.0006	0.012	0.97	0.978	0.975
PerturbDiff2026.03	0.522	—	0.572	—	0.734	0.445	—	—	0.686	0.0006	0.012	—	—	—
Linear2026.02	0.505	0.993	0.576	0.382	0.76	0.514	60.5	63.2	0.723	0.0004	0.009	0.887	0.881	0.912
Linear2026.03	0.505	—	0.576	—	0.76	0.514	—	—	0.723	0.0004	0.009	—	—	—
Mean Variant2026.02	0.504	0.976	0.508	0.023	0.688	0.578	50.8	50.8	0.461	0.0007	0.01	0.682	0.694	0.76
Mean Variant (per Cell Type)2026.03	0.504	—	0.508	—	0.688	0.578	—	—	0.461	0.0007	0.01	—	—	—
CPA2026.02	0.502	0.946	0.504	0.19	0.71	0.466	50.5	50	0.425	0.0009	0.011	0.654	0.593	0.585
CPA2026.03	0.502	—	0.504	—	0.71	0.466	—	—	0.425	0.0009	0.011	—	—	—
STATE2026.02	0.499	0.807	0.522	0.301	0.665	0.644	52	50.6	0.535	0.0021	0.021	0.789	0.846	0.854
Mean2026.02	0.43	0.703	0.504	0.35	0.595	0.28	50.6	50.2	0.205	0.0031	0.026	0.515	0.508	0.508
Mean2026.03	0.43	—	0.504	—	0.595	0.28	—	—	0.205	0.0031	0.026	—	—	—
Mean Variant2026.02	0.429	0.707	0.504	0.469	0.591	0.275	50.5	50	0.193	0.0031	0.026	0.501	0.501	0.501
Mean Variant (Overall)2026.03	0.429	—	0.504	—	0.591	0.275	—	—	0.193	0.0031	0.026	—	—	—
Mean Variant2026.02	0.427	0.705	0.504	0.475	0.587	0.27	50.5	50	0.185	0.0031	0.026	0.492	0.496	0.498
Mean Variant (per Batch)2026.03	0.427	—	0.504	—	0.587	0.27	—	—	0.185	0.0031	0.026	—	—	—
Squidiff2026.02	0.42	-616.98	0.581	—	0.501	0.276	58.1	50	0.011	5.627	2.244	0.505	0.506	0.505
Squidiff2026.03	0.42	—	0.581	—	0.501	0.276	—	—	0.011	5.627	2.244	—	—	—
CellFlow2026.02	0.183	0.682	0.313	0.346	0.638	0.298	32	50	0.269	0.0031	0.027	0.608	0.564	0.55
CellFlow2026.03	0.183	—	0.313	—	0.638	0.298	—	—	0.269	0.0031	0.027	—	—	—