Multi-label Graph Classification on Peptides func
72.61Average PrecisionGCN+
Evaluation Results
| Method | Links | |
|---|---|---|
| GCN+Model Category=Modified and Re-evaluated, Structural and Positional Encoding=true2026.05 | 72.61 | |
| DRew-GCN+LapPEModel Category=Multi-hop GNNs, Structural and Positional Encoding=true2026.05 | 71.5 | |
| DRew-GIN+LapPEModel Category=Multi-hop GNNs, Structural and Positional Encoding=true2026.05 | 71.26 | |
| Neural WalkerModel Category=GNNs, Structural and Positional Encoding=true2026.05 | 70.96 | |
| GMNModel Category=GNNs, Structural and Positional Encoding=true2026.05 | 70.71 | |
| GIN+Model Category=Modified and Re-evaluated, Structural and Positional Encoding=true2026.05 | 70.59 | |
| GRAMAGATEDGCNModel Category=GNNs, Structural and Positional Encoding=true2026.05 | 70.49 | |
| GatedGCN+Model Category=Modified and Re-evaluated, Structural and Positional Encoding=true2026.05 | 70.06 | |
| DRew-GCNModel Category=Multi-hop GNNs, Structural and Positional Encoding=true2026.05 | 69.96 | |
| DRew-GatedGCN+LapPEModel Category=Multi-hop GNNs, Structural and Positional Encoding=true2026.05 | 69.77 | |
| GINE-MLP-Mixer# Params=397k, Time (S/Epoch)=8.59, Memory (MB)=1,0102022.12 | 69.7 | |
| Graph-ViT + GFSAGFSA=true2023.12 | 69.64 | |
| DRew-GCN+LapPEModel Category=Modified and Re-evaluated, Structural and Positional Encoding=true2026.05 | 69.45 | |
| GatedGCN-ViT# Params=692k, Time (S/Epoch)=9.07, Memory (MB)=8482022.12 | 69.42 | |
| DRew-GINModel Category=Multi-hop GNNs, Structural and Positional Encoding=true2026.05 | 69.4 | |
| GatedGCN-MLP-Mixer# Params=527k, Time (S/Epoch)=8.96, Memory (MB)=9692022.12 | 69.32 | |
| GINE-ViT# Params=561k, Time (S/Epoch)=8.98, Memory (MB)=9202022.12 | 69.19 | |
| Graph-ViTGFSA=false2023.12 | 69.19 | |
| GraphTrans-ViT# Params=757k, Time (S/Epoch)=9.94, Memory (MB)=9752022.12 | 68.76 | |
| GCNModel Category=Modified and Re-evaluated, Structural and Positional Encoding=true2026.05 | 68.6 | |
| GraphTrans-MLP-Mixer# Params=593k, Time (S/Epoch)=9.94, Memory (MB)=9752022.12 | 68.58 | |
| GCN-ViT# Params=493k, Time (S/Epoch)=8.9, Memory (MB)=6282022.12 | 68.55 | |
| MixHop-GCN+LapPEModel Category=Multi-hop GNNs, Structural and Positional Encoding=true2026.05 | 68.43 | |
| GCN-MLP-Mixer# Params=329k, Time (S/Epoch)=8.48, Memory (MB)=7162022.12 | 68.32 | |
| DIGL+MPNN+LapPEModel Category=Multi-hop GNNs, Structural and Positional Encoding=true2026.05 | 68.3 | |
| GatedGCNModel Category=Modified and Re-evaluated, Structural and Positional Encoding=true2026.05 | 67.65 | |
| SWANModel Category=GNNs, Structural and Positional Encoding=true2026.05 | 67.51 | |
| Graph-MambaModel Category=GNNs, Structural and Positional Encoding=true2026.05 | 67.39 | |
| DRew-GatedGCNModel Category=Multi-hop GNNs, Structural and Positional Encoding=true2026.05 | 67.33 | |
| SUN# Params=508k, Time (S/Epoch)=376.66, Memory (MB)=18,9412022.12 | 67.3 | |
| LGSMModel Category=Ours, Structural and Positional Encoding=false2026.05 | 66.85 | |
| GINEModel Category=Modified and Re-evaluated, Structural and Positional Encoding=true2026.05 | 66.21 | |
| GPS + GFSAGFSA=true2023.12 | 65.93 | |
| MixHop-GCNModel Category=Multi-hop GNNs, Structural and Positional Encoding=true2026.05 | 65.92 | |
| GPS# Params=504k, Time (S/Epoch)=11.83, Memory (MB)=6,9042022.12 | 65.62 | |
| GPSGFSA=false2023.12 | 65.35 | |
| GraphGPS+LapPEModel Category=Transformers, Structural and Positional Encoding=true2026.05 | 65.35 | |
| GraphGPS+LapPEModel Category=Modified and Re-evaluated, Structural and Positional Encoding=true2026.05 | 65.34 | |
| GNN-AK+# Params=631k, Time (S/Epoch)=22.52, Memory (MB)=7,8552022.12 | 64.8 | |
| DIGL+MPNNModel Category=Multi-hop GNNs, Structural and Positional Encoding=true2026.05 | 64.69 | |
| SAN + RWSE# Params=500k, Time (S/Epoch)=68.44, Memory (MB)=19,6912022.12 | 64.39 | |
| SAN + LapPE# Params=493k, Time (S/Epoch)=80.47, Memory (MB)=12,4932022.12 | 63.84 | |
| SAN+LapPEModel Category=Transformers, Structural and Positional Encoding=true2026.05 | 63.84 | |
| Transformer + LapPE# Params=488k, Time (S/Epoch)=9.74, Memory (MB)=6,6612022.12 | 63.26 | |
| Transformer+LapPEModel Category=Transformers, Structural and Positional Encoding=true2026.05 | 63.26 | |
| GatedGCN + RWSE# Params=506k, Time (S/Epoch)=5.75, Memory (MB)=1,0352022.12 | 60.69 | |
| GraphCONModel Category=GNNs, Structural and Positional Encoding=true2026.05 | 60.22 | |
| A-DGNModel Category=GNNs, Structural and Positional Encoding=true2026.05 | 59.75 | |
| GCN# Params=508k, Time (S/Epoch)=4.59, Memory (MB)=6962022.12 | 59.3 | |
| GatedGCN# Params=509k, Time (S/Epoch)=5.48, Memory (MB)=1,0382022.12 | 58.64 | |
| GRANDModel Category=GNNs, Structural and Positional Encoding=true2026.05 | 57.89 | |
| GINE# Params=476k, Time (S/Epoch)=3.94, Memory (MB)=6592022.12 | 54.98 |