List your company
ResearchFormerly WizWand

Graph Regression on Peptides-struct

0.239MAEESA+
0.237920.245210.25250.25979Dec 27, 2022Jul 23, 2023Feb 17, 2024Sep 13, 2024Apr 10, 2025Nov 5, 2025Jun 2, 2026
Updated 4mo ago

Evaluation results

MethodLinks
ESA+tuned=true, structural encoding=RWSE2024.020.239
MAVNBackbone=GatedGCN2026.060.241
GCN+Model Category=Modified and Re-evaluated, Structural and Positional Encoding=true2026.050.2421
IPR-MPNN2026.060.2422
NBA2026.060.2424
UniGCN2026.060.2425
GIN+Model Category=Modified and Re-evaluated, Structural and Positional Encoding=true2026.050.2429
S3GNNModel Type=GNN2026.050.2429
GatedGCN+Model Category=Modified and Re-evaluated, Structural and Positional Encoding=true2026.050.2431
MAVNBackbone=GCN2026.060.2432
GEAET2026.060.2445
AMP2026.060.2446
S2GNN + PEModel Type=GNN2026.050.2447
S2GCN2026.060.2447
GINE-ViT# Params=561k, Time (S/Epoch)=8.77, Memory (MB)=9022022.120.2449
Graph ViTModel Type=Transformer2026.050.2449
Graph ViT2026.060.2449
MAVNBackbone=GINE2026.060.2453
GraphTrans-ViT# Params=757k, Time (S/Epoch)=9.58, Memory (MB)=9812022.120.2455
GCN+FNModel Type=VN2026.050.2456
MP-SSMModel Type=State Space2026.050.2458
MPNN+VNG2026.060.2458
GRAMAGATEDGCNModel Category=GNNs, Structural and Positional Encoding=true2026.050.2459
GCNModel Category=Modified and Re-evaluated, Structural and Positional Encoding=true2026.050.246
GRITModel Type=Transformer2026.050.246
GatedGCN+VN†Model Type=VN2026.050.246
GCNModel Type=GNN2026.050.246
GRIT2026.060.246
GCN*2026.060.246
Graph-ViT + GFSAGFSA=true2023.120.2461
Neural WalkerModel Category=GNNs, Structural and Positional Encoding=true2026.050.2463
GatedGCN-ViT# Params=692k, Time (S/Epoch)=9.00, Memory (MB)=8332022.120.2465
GCN-ViT# Params=493k, Time (S/Epoch)=8.55, Memory (MB)=6092022.120.2468
LGSMModel Category=Ours, Structural and Positional Encoding=false2026.050.247
GatedGCN+FNModel Type=VN2026.050.247
GINEModel Category=Modified and Re-evaluated, Structural and Positional Encoding=true2026.050.2473
GMNModel Category=GNNs, Structural and Positional Encoding=true2026.050.2473
GMNModel Type=State Space2026.050.2473
GINE*2026.060.2473
Graph-ViTGFSA=false2023.120.2474
G.MLPMixerModel Type=Transformer2026.050.2475
MPNN+VN2026.060.2475
GatedGCNModel Category=Modified and Re-evaluated, Structural and Positional Encoding=true2026.050.2477
PR-MPNN2026.060.2477
GatedGCN*2026.060.2477
Graph-MambaModel Class=SSM2026.010.2478
Graph-MambaModel Category=GNNs, Structural and Positional Encoding=true2026.050.2478
Graph MambaModel Type=State Space2026.050.2478
GraphTrans-MLP-Mixer# Params=593k, Time (S/Epoch)=9.00, Memory (MB)=1,0482022.120.248
ExphormerModel Type=Transformer2026.050.2481
Exphormer2026.060.2481
SWANModel Category=GNNs, Structural and Positional Encoding=true2026.050.2485
TIGTModel Type=Transformer2026.050.2485
SWANModel Type=GNN2026.050.2485
GCN-MLP-Mixer# Params=329k, Time (S/Epoch)=8.12, Memory (MB)=6792022.120.2486
S2GNNModel Type=GNN2026.050.2487
GINE-MLP-Mixer# Params=397k, Time (S/Epoch)=8.51, Memory (MB)=9742022.120.2494
GPS + GFSAGFSA=true2023.120.2496
SUN# Params=508k, Time (S/Epoch)=384.26, Memory (MB)=17,2152022.120.2498
GatedGCN+VN‡Model Type=VN2026.050.2498
GPSGFSA=false2023.120.25
GPSModel Class=GT2026.010.25
StandardAttention=Standard2026.030.25
GraphGPS+LapPEModel Category=Transformers, Structural and Positional Encoding=true2026.050.25
MeGraph2026.060.2507
GatedGCN-MLP-Mixer# Params=527k, Time (S/Epoch)=8.44, Memory (MB)=8872022.120.2508
GraphGPS+LapPEModel Category=Modified and Re-evaluated, Structural and Positional Encoding=true2026.050.2509
GCN+VNModel Type=VN2026.050.2509
GraphGPS*2026.060.2509
QUESTAttention=QUEST2026.030.251
ExphormerModel Class=GT2026.010.2512
GPS# Params=504k, Time (S/Epoch)=11.74, Memory (MB)=6,8782022.120.2515
DRew-GCN+LapPEModel Category=Modified and Re-evaluated, Structural and Positional Encoding=true2026.050.2517
Transformer + LapPE# Params=488k, Time (S/Epoch)=9.61, Memory (MB)=6,6462022.120.2529
Transformer + LapPE2026.040.2529
Transformer+LapPEModel Category=Transformers, Structural and Positional Encoding=true2026.050.2529
DRew-GCN+LapPEModel Category=Multi-hop GNNs, Structural and Positional Encoding=true2026.050.2536
DRew-GCN + PEModel Type=Rewiring2026.050.2536
DRew2026.060.2536
DRew-GatedGCN+LapPEModel Category=Multi-hop GNNs, Structural and Positional Encoding=true2026.050.2539
PathNN-SP+K=42023.060.254
Stable-ChebNetModel Type=GNN2026.050.2542
SAN + RWSE# Params=500k, Time (S/Epoch)=70.39, Memory (MB)=12,1112022.120.2545
PathNN-SPK=42023.060.2545
SAN + RWSE2026.040.2545
BN-PoolPooler=BN-Pool2025.010.255
SpecformerModel Type=Transformer2026.050.255
PathNN-APK=42023.060.2569
DRew-GIN+LapPEModel Category=Multi-hop GNNs, Structural and Positional Encoding=true2026.050.2606
FloydNetModel Class=Ours2026.010.2612
MixHop-GCN+LapPEModel Category=Multi-hop GNNs, Structural and Positional Encoding=true2026.050.2614
DIGL+MPNN+LapPEModel Category=Multi-hop GNNs, Structural and Positional Encoding=true2026.050.2616
ECPoolPooler=ECPool2025.010.262
BiScale-GTR (Molecule)2026.040.2621
ChebNetModel Type=GNN2026.050.2627
k-MISPooler=k-MIS2025.010.263
GraclusPooler=Graclus2025.010.264
JBGNNPooler=JBGNN2025.010.264
MinCutPooler=MinCut2025.010.265
Top-kPooler=Top-k2025.010.266