Functional Site Prediction on StructTokenBench (SupFam) benchmark leaderboard · SOTA2 Research

Functional Site Prediction on StructTokenBench (SupFam)

91.55BindInt AUROCAminoA. + ProVQ

Evaluation Results

Method	Links
AminoA. + ProVQ2026.03		91.55	66.76	93.09	89.6	85.94	86.04	72.21
Van.VQ + ProVQ2026.03		91.04	67.55	90.94	84.42	85.61	84.13	72.78
ESM32026.03		90.77	65.22	89.82	74.65	80.53	82.36	61.97
AminoA.2026.03		90.53	68.3	91.91	87.59	86.6	84.57	72.02
Van.VQ2026.03		86.71	62.92	85	70.92	74.6	82.09	67.24
ProTokens2026.03		86.05	60.47	83.85	64.05	74.33	78.9	67.52
FoldSeek2026.03		46.2	52.41	51.41	53.78	51.39	52.53	50.56