DNA Sequence Reconstruction on Noisy-DNA
0.162Levenshtein DistanceTReconLM
Evaluation results
| Method | Links | ||
|---|---|---|---|
| TReconLMN=10, fine-tuned=true2025.07 | 0.162 | 64.8 | |
| TReconLMN=9, fine-tuned=true2025.07 | 0.166 | 68.1 | |
| TReconLMN=8, fine-tuned=true2025.07 | 0.176 | 70.5 | |
| TReconLMN=7, fine-tuned=true2025.07 | 0.191 | 76.1 | |
| DNAformerN=9, fine-tuned=true2025.07 | 0.214 | 88.4 | |
| TReconLMN=6, fine-tuned=true2025.07 | 0.216 | 81.5 | |
| DNAformerN=10, fine-tuned=true2025.07 | 0.218 | 87.7 | |
| DNAformerN=8, fine-tuned=true2025.07 | 0.227 | 89.1 | |
| TReconLMN=5, fine-tuned=true2025.07 | 0.233 | 86 | |
| DNAformerN=7, fine-tuned=true2025.07 | 0.238 | 91.3 | |
| TReconLMN=9, pretrained=true2025.07 | 0.259 | 99.9 | |
| TReconLMN=10, pretrained=true2025.07 | 0.261 | 99.9 | |
| DNAformerN=6, fine-tuned=true2025.07 | 0.262 | 95.1 | |
| TReconLMN=8, pretrained=true2025.07 | 0.264 | 99.9 | |
| ITRN=102025.07 | 0.267 | 96.7 | |
| ITRN=92025.07 | 0.269 | 96.1 | |
| TReconLMN=4, fine-tuned=true2025.07 | 0.27 | 91.9 | |
| TReconLMN=7, pretrained=true2025.07 | 0.271 | 100 | |
| ITRN=82025.07 | 0.276 | 96.6 | |
| DNAformerN=5, fine-tuned=true2025.07 | 0.279 | 96.1 | |
| TReconLMN=6, pretrained=true2025.07 | 0.289 | 99.8 | |
| TrellisBMAN=92025.07 | 0.291 | 99.1 | |
| ITRN=72025.07 | 0.293 | 97 | |
| TReconLMN=3, fine-tuned=true2025.07 | 0.294 | 94.7 | |
| TReconLMN=5, pretrained=true2025.07 | 0.298 | 100 | |
| TrellisBMAN=82025.07 | 0.309 | 98.7 | |
| ITRN=62025.07 | 0.312 | 97.9 | |
| RobuSeqNetN=9, fine-tuned=true2025.07 | 0.318 | 99.7 | |
| DNAformerN=4, fine-tuned=true2025.07 | 0.319 | 98.2 | |
| MUSCLEN=92025.07 | 0.319 | 99.3 | |
| MUSCLEN=102025.07 | 0.321 | 99.1 | |
| RobuSeqNetN=10, fine-tuned=true2025.07 | 0.322 | 99.7 | |
| TReconLMN=4, pretrained=true2025.07 | 0.323 | 99.9 | |
| RobuSeqNetN=8, fine-tuned=true2025.07 | 0.323 | 99.8 | |
| RobuSeqNetN=7, fine-tuned=true2025.07 | 0.326 | 99.8 | |
| TReconLMN=2, fine-tuned=true2025.07 | 0.33 | 98.3 | |
| MUSCLEN=82025.07 | 0.33 | 99.4 | |
| MUSCLEN=72025.07 | 0.334 | 99.7 | |
| TrellisBMAN=102025.07 | 0.337 | 98.6 | |
| TReconLMN=3, pretrained=true2025.07 | 0.345 | 100 | |
| RobuSeqNetN=6, fine-tuned=true2025.07 | 0.345 | 99.8 | |
| BMALAN=92025.07 | 0.345 | 99.9 | |
| BMALAN=102025.07 | 0.346 | 100 | |
| DNAformerN=3, fine-tuned=true2025.07 | 0.347 | 99.2 | |
| MUSCLEN=62025.07 | 0.347 | 99.6 | |
| RobuSeqNetN=5, fine-tuned=true2025.07 | 0.348 | 99.8 | |
| MUSCLEN=52025.07 | 0.348 | 99.4 | |
| BMALAN=82025.07 | 0.351 | 100 | |
| BMALAN=72025.07 | 0.354 | 100 | |
| ITRN=52025.07 | 0.358 | 98.9 | |
| VSN=72025.07 | 0.366 | 99.3 | |
| RobuSeqNetN=4, fine-tuned=true2025.07 | 0.368 | 100 | |
| MUSCLEN=42025.07 | 0.371 | 99.8 | |
| ITRN=42025.07 | 0.371 | 99.1 | |
| BMALAN=62025.07 | 0.372 | 99.9 | |
| TrellisBMAN=72025.07 | 0.374 | 99.1 | |
| RobuSeqNetN=3, fine-tuned=true2025.07 | 0.377 | 99.9 | |
| VSN=82025.07 | 0.377 | 99.6 | |
| VSN=92025.07 | 0.377 | 99.7 | |
| BMALAN=52025.07 | 0.378 | 100 | |
| VSN=62025.07 | 0.378 | 99.5 | |
| VSN=102025.07 | 0.38 | 99.5 | |
| ITRN=22025.07 | 0.383 | 99.3 | |
| VSN=42025.07 | 0.385 | 99.7 | |
| VSN=32025.07 | 0.386 | 99.6 | |
| VSN=52025.07 | 0.388 | 99.5 | |
| TReconLMN=2, pretrained=true2025.07 | 0.389 | 100 | |
| TrellisBMAN=52025.07 | 0.39 | 99.5 | |
| VSN=22025.07 | 0.392 | 99.4 | |
| BMALAN=42025.07 | 0.398 | 100 | |
| RobuSeqNetN=2, fine-tuned=true2025.07 | 0.405 | 99.9 | |
| DNAformerN=2, fine-tuned=true2025.07 | 0.407 | 99.9 | |
| BMALAN=32025.07 | 0.407 | 100 | |
| MUSCLEN=32025.07 | 0.412 | 99.9 | |
| TrellisBMAN=62025.07 | 0.427 | 99.2 | |
| MUSCLEN=22025.07 | 0.435 | 100 | |
| BMALAN=22025.07 | 0.439 | 100 | |
| TrellisBMAN=42025.07 | 0.451 | 99.8 | |
| TrellisBMAN=32025.07 | 0.523 | 100 | |
| TrellisBMAN=22025.07 | 0.544 | 100 | |
| ITRN=32025.07 | 0.557 | 100 |