Cell Type Clustering on OOD Tissue Data D_s^{u2} (unseen split 2)
0.839NMIscCello
Evaluation Results
| Method | Links | ||||
|---|---|---|---|---|---|
| scCelloMethod Category=Ontology-Enhanced TFMs, Fine-tuned=true2024.08 | 0.839 | 0.675 | 0.601 | 0.705 | |
| SupMethod Category=Ontology-Agnostic TFMs, Fine-tuned=true2024.08 | 0.838 | 0.621 | 0.58 | 0.68 | |
| UCEMethod Category=Ontology-Agnostic TFMs, Fine-tuned=true2024.08 | 0.836 | 0.61 | 0.562 | 0.67 | |
| MGP+SupMethod Category=Ontology-Agnostic TFMs, Fine-tuned=true2024.08 | 0.833 | 0.612 | 0.573 | 0.672 | |
| scVIMethod Category=Non-TFM Methods2024.08 | 0.816 | 0.55 | 0.537 | 0.634 | |
| scTabMethod Category=Ontology-Agnostic TFMs, Fine-tuned=true2024.08 | 0.815 | 0.616 | 0.541 | 0.657 | |
| SeuratMethod Category=Non-TFM Methods2024.08 | 0.813 | 0.56 | 0.535 | 0.636 | |
| MGPMethod Category=Ontology-Agnostic TFMs, Fine-tuned=true2024.08 | 0.802 | 0.544 | 0.537 | 0.628 | |
| Raw DataMethod Category=Non-TFM Methods2024.08 | 0.8 | 0.585 | 0.508 | 0.631 | |
| scGPTMethod Category=Ontology-Agnostic TFMs, Fine-tuned=true2024.08 | 0.794 | 0.556 | 0.531 | 0.627 | |
| GeneformerMethod Category=Ontology-Agnostic TFMs, Fine-tuned=true2024.08 | 0.787 | 0.499 | 0.505 | 0.597 | |
| HarmonyMethod Category=Non-TFM Methods2024.08 | 0.684 | 0.4 | 0.46 | 0.515 |