Cell type clustering on Curated In-Distribution (ID) (test)
47.9NMIHASSL
Evaluation results
| Method | Links | |||||
|---|---|---|---|---|---|---|
| HASSLfull=true2026.07 | 47.9 | — | — | — | 47.3 | |
| HASSLDouble Teacher=false2026.07 | 47.6 | — | — | — | 46.9 | |
| DINOv3retrained on subset=true, Clustering=DBSCAN2026.07 | 47.2 | — | — | — | 46.6 | |
| HASSLHDBSCAN=false2026.07 | 47.2 | — | — | — | 46.2 | |
| Cellpaint-DINO2026.07 | 47 | — | — | — | 46.4 | |
| DINOv3retrained on subset=true, Clustering=Unweighted HDBSCAN2026.07 | 47 | — | — | — | 46.3 | |
| DINOv3retrained on subset=true, variant=baseline2026.07 | 46.8 | — | — | — | 46.2 | |
| HCSCretrained on subset=true2026.07 | 45.3 | — | — | — | 44.6 | |
| ChadaViT2026.07 | 45.2 | — | — | — | 44.6 | |
| scDINO2026.07 | 43.9 | — | — | — | 43.3 | |
| OpenPhenom2026.07 | 40.3 | — | — | — | 39.5 | |
| scCellomode=Zero-shot2024.08 | 0.785 | 0.558 | 0.667 | 0.67 | — | |
| scTabmode=Zero-shot2024.08 | 0.707 | 0.479 | 0.544 | 0.577 | — | |
| Supmode=Zero-shot2024.08 | 0.703 | 0.393 | 0.569 | 0.555 | — | |
| UCEmode=Zero-shot2024.08 | 0.67 | 0.304 | 0.494 | 0.489 | — | |
| MGPmode=Zero-shot2024.08 | 0.662 | 0.306 | 0.451 | 0.473 | — | |
| MGP+Supmode=Zero-shot2024.08 | 0.661 | 0.337 | 0.55 | 0.516 | — | |
| scVImode=Zero-shot2024.08 | 0.66 | 0.297 | 0.464 | 0.474 | — | |
| Seuratmode=Zero-shot2024.08 | 0.648 | 0.27 | 0.407 | 0.442 | — | |
| Harmonymode=Zero-shot2024.08 | 0.621 | 0.261 | 0.382 | 0.421 | — | |
| Geneformermode=Zero-shot2024.08 | 0.616 | 0.261 | 0.418 | 0.432 | — | |
| scGPTmode=Zero-shot2024.08 | 0.615 | 0.258 | 0.442 | 0.438 | — | |
| Raw Datamode=Zero-shot2024.08 | 0.566 | 0.237 | 0.453 | 0.419 | — |