CDR structure and sequence generation on SAbDab 13 (test)
81.11CDR H1 AA IdentityAbDiffuser
Evaluation Results
| Method | Links | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AbDiffuserGeneration strategy=all-at-once, Temperature (T)=0.012023.07 | 81.11 | 1.075 | 74.27 | 0.946 | 37.27 | 2.795 | 86.26 | 1.115 | 86.85 | 1.238 | 77.06 | 0.966 | |
| AbDiffuserGeneration strategy=all-at-once, Temperature (T)=0.752023.07 | 79.76 | 1.083 | 72.96 | 0.95 | 36.53 | 2.805 | 85.6 | 1.098 | 85.71 | 1.237 | 76.29 | 0.955 | |
| AbDiffuserGeneration strategy=all-at-once2023.07 | 79.09 | 1.12 | 72.33 | 0.995 | 36.14 | 2.921 | 85.08 | 1.138 | 85.02 | 1.273 | 75.68 | 0.99 | |
| AbDiffuserGeneration strategy=all-at-once, Temperature (T)=0.01, Side chains (s.c.)=true2023.07 | 77.28 | 2.463 | 66.89 | 2.01 | 35.56 | 3.124 | 83.1 | 1.525 | 82.95 | 1.623 | 74.19 | 1.502 | |
| AbDiffuserGeneration strategy=all-at-once, Side chains (s.c.)=true2023.07 | 76.3 | 1.584 | 65.72 | 1.449 | 34.1 | 3.346 | 81.44 | 1.462 | 83.22 | 1.397 | 73.15 | 1.591 | |
| AbDiffuserGeneration strategy=all-at-once, Temperature (T)=0.75, Side chains (s.c.)=true2023.07 | 76.06 | 1.713 | 66.38 | 1.512 | 34.71 | 3.214 | 81.93 | 1.373 | 83.54 | 1.351 | 73.32 | 1.509 | |
| DiffAbGeneration strategy=all-at-once, Minimization=true2023.07 | 66.37 | 1.371 | 42.82 | 1.337 | 28.27 | 3.798 | 62.91 | 1.52 | 62.59 | 1.653 | 49.38 | 1.616 | |
| DiffAbGeneration strategy=all-at-once2023.07 | 66.37 | 0.802 | 42.82 | 0.722 | 28.27 | 3.55 | 62.91 | 1.12 | 62.59 | 1.025 | 49.38 | 1.066 | |
| DiffAbGeneration strategy=one-at-a-time, Minimization=true2023.07 | 65.75 | 1.188 | 49.31 | 1.076 | 26.78 | 3.597 | 55.67 | 1.388 | 59.32 | 1.373 | 46.47 | 1.627 | |
| Rosetta (RAbD)Generation strategy=one-at-a-time2023.07 | 22.85 | 2.261 | 25.5 | 1.641 | 22.14 | 2.9 | 34.27 | 1.204 | 26.3 | 1.767 | 20.73 | 1.624 |