Binding Affinity Prediction on SKEMPI2 (all mutations) benchmark leaderboard · SOTA2 Research

Binding Affinity Prediction on SKEMPI2 (all mutations)

0.669Pearson Corr (Overall)DiffAffinity

Evaluation Results

Method	Links
DiffAffinity2023.10		0.669	0.556	1.535	1.093	0.744	0.896	0.422	0.397
DiffAffinity2023.10		0.65	0.602	2.051	1.54	0.784	0.921	0.414	0.387
DiffAffinity*2023.10		0.646	0.538	1.578	1.113	0.742	0.741	0.415	0.392
RDE-Net2023.10		0.632	0.527	1.601	1.142	0.731	0.887	0.415	0.376
DDGPred2023.10		0.63	0.4	1.313	0.995	0.696	0.892	0.356	0.321
ESM2*2023.10		0.623	0.498	1.615	1.179	0.721	0.887	0.362	0.316
DiffAffinity*2023.10		0.613	0.542	2.133	1.606	0.75	0.75	0.407	0.379
ESM2*2023.10		0.603	0.529	2.15	1.67	0.758	0.909	0.333	0.304
RDE-Net2023.10		0.601	0.567	2.157	1.631	0.768	0.898	0.39	0.36
DDGPred2023.10		0.591	0.503	2.181	1.67	0.759	0.913	0.373	0.385
flex ddG2023.10		0.402	0.427	1.587	1.102	0.675	0.866	0.414	0.386
flex ddG2023.10		0.398	0.419	1.765	1.326	0.669	0.854	0.401	0.363
DiffAffinity-Linear2023.10		0.326	0.305	1.954	1.399	0.642	0.857	0.222	0.222
ESM-IF2023.10		0.326	0.335	2.645	1.956	0.637	0.754	0.202	0.149
FoldX2023.10		0.319	0.416	1.959	1.357	0.671	0.839	0.376	0.375
ESM-IF2023.10		0.319	0.281	1.886	1.286	0.59	0.768	0.224	0.202
Rosetta2023.10		0.311	0.346	1.617	1.131	0.656	0.81	0.328	0.298
DiffAffinity-Linear2023.10		0.277	0.288	2.593	1.961	0.629	0.867	0.193	0.195
FoldX2023.10		0.256	0.418	2.608	1.926	0.704	0.841	0.333	0.34
Rosetta2023.10		0.199	0.23	2.658	2.024	0.621	0.798	0.191	0.083
ESM-1v2023.10		0.192	0.157	1.961	1.368	0.541	0.735	0.007	-0.012
ESM-1v2023.10		0.192	0.175	2.759	2.119	0.542	0.678	-0.06	-0.128
ESM22023.10		0.17	0.163	2.658	2.021	0.566	0.746	0.01	0.01
ESM22023.10		0.133	0.138	2.048	1.46	0.547	0.738	0.044	0.039