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CUSHAW
CUDA-compatible short read alignment algorithm for multiple GPUs sharing a single host, based on the Burrows-Wheeler transform and programmed in CUDA C++.
What is CUSHAW?
CUDA-compatible short read alignment algorithm for multiple GPUs sharing a single host, based on the Burrows-Wheeler transform and programmed in CUDA C++. Provides ungapped alignment only. Latest release 1.0.40.
Product typeScientific Models
Pricing ·
DeploymentSelf-hosted · On-premises
APINot available
What teams use CUSHAW for
Next-generation sequencing read alignment on CUDA-enabled GPUs
Gapped and ungapped short-read alignment to large genomes using the Burrows-Wheeler transform
Integrations and access
Platforms, integrations, and language support vary by plan and region. Confirm final requirements with the vendor.
Platforms
IntegrationsAPI and webhooks
Languages
Support
What reviewers say
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Enterprise readiness
Compliance claims are normalized from current vendor documentation and independently reviewed by SOTA2.
Data retention:
Benchmarks and comparisons
Independent benchmarksStructured task results are being verified.
Side-by-side comparisonsComparison workspaces will be available in a later release.
