CUSHAW
Next-generation sequencing read alignment software package based on multi-core and many-core computing, developed by Yongchao Liu and hosted on SourceForge.
About CUSHAW
Next-generation sequencing read alignment software package based on multi-core and many-core computing, developed by Yongchao Liu and hosted on SourceForge.
Products
CUDA-compatible short read alignment algorithm for multiple GPUs sharing a single host, based on the Burrows-Wheeler transform and programmed in CUDA C++.
Gapped short-read alignment for GPU computing.
Sensitive and accurate base-space and color-space short-read alignment with hybrid seeding.
Empowers faster gapped short-read alignment using GPU computing.
Parallel and scalable short-read alignment on multi-core clusters using UPC++.
Security and compliance
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