ResearchBenchmarksTranscriptomic perturbation prediction on LINCS L1000 Seven Cell Lines 2020Transcriptomic perturbation prediction on LINCS L1000 Seven Cell Lines 2020Follow0.5088RMSECS-model0.3505681.4186342.48673.554766May 8, 2026Evaluation resultsMethodMethodLinksRMSEPCCPrecision@100 (Positive)Precision@100 (Negative)CS-model2026.050.50880.618344.544.81TranSiGen2026.050.69030.533237.8538.86DLEPS2026.051.49540.426824.630.87MultiDCP2026.051.76970.446123.7828.72DeepCE2026.051.77280.412122.8227.13CIGER2026.054.46460.416523.3728.49