Transcriptional response prediction on GenePT perturbations (held-out)
0.4579R2GDE
Evaluation results
| Method | Links | ||
|---|---|---|---|
| GDETarget Space=GDE latent space, Features=GenePT embeddings, Model=Ridge regression, Generalization=zero-shot2025.05 | 0.4579 | 1.5007 | |
| scVIGeneralization=zero-shot2025.05 | 0.4215 | 1.5514 | |
| MeanTarget Space=mean expression space, Features=GenePT embeddings, Model=Linear ridge regression, Generalization=zero-shot2025.05 | 0.3783 | 1.855 |