Single-cell perturbation prediction on E-MTAB-14065 (LOO mode) benchmark leaderboard · SOTA2 Research

Single-cell perturbation prediction on E-MTAB-14065 (LOO mode)

0.7531Delta Pearson (DE genes)SAMS-VAE

Evaluation Results

Method	Links
SAMS-VAE2026.05		0.7531	0.6723	0.9322	0.4892	79.7	16.98
LFADS2026.05		0.7511	0.6347	0.9583	0.4644	74.54	19.56
CITE-VAE2026.05		0.751	0.6346	0.9852	0.4712	83.03	30.61
ElasticNet2026.05		0.7354	0.7075	0.7212	0.5502	86.62	38.46
scGPT2026.05		0.7199	0.666	0.9253	0.5029	83.87	29.97
UCE2026.05		0.463	—	—	—	80.67	20.58
scNODE2026.05		0.3428	0.6719	0.9718	0.4849	78.45	26.4
DiscrepancyVAE2026.05		0.3287	0.8902	0.8236	0.7102	70.98	20.63
RENGE2026.05		0.2496	0.7724	0.8601	0.807	87.87	99.44
CellOT2026.05		0.0784	—	—	—	56.16	7.1