Reaction-to-Enzyme Retrieval on ReactZyme (Reaction Similarity-based Split)
43Hit@1TIGER
Evaluation results
| Method | Links | ||
|---|---|---|---|
| TIGERText source=ESM2Text2026.05 | 43 | 31.9 | |
| TIGERText source=ProtT32026.05 | 42.8 | 33.7 | |
| Bi-RNNEncoder=MAT-2D + ESM2026.05 | 17.1 | 17 | |
| CLIPZymeEncoder=MAT-2D + ESM2026.05 | 14.6 | 15.2 | |
| ReactZymeEncoder=UniMol-3D + ESM2026.05 | 13.5 | 13.4 | |
| CLIPZymeEncoder=UniMol-3D + ESM2026.05 | 13 | 12.5 | |
| GNNEncoder=UniMol-3D + ESM2026.05 | 12.4 | 11.3 | |
| Bi-RNNEncoder=UniMol-3D + ESM2026.05 | 12.4 | 12.1 | |
| ReactZymeEncoder=UniMol-3D + SaProt2026.05 | 11.4 | 10.4 | |
| Fingerprint2026.05 | 11.4 | 10.4 | |
| ReactZymeEncoder=MAT-2D + ESM2026.05 | 9.3 | 9.6 | |
| GNNEncoder=UniMol-3D + SaProt2026.05 | 9.2 | 10.5 |