Protein Reconstruction on AFDB 512 samples
1.17RMSDAdaptive Protein Tokenizer (APT)
Evaluation Results
| Method | Links | ||
|---|---|---|---|
| Adaptive Protein Tokenizer (APT)tail_configuration=Full tail2026.02 | 1.17 | 0.929 | |
| Kanzi2026.02 | 1.18 | 0.936 | |
| Adaptive Protein Tokenizer (APT)token_count=128, teacher_forced=true2026.02 | 1.94 | 0.88 | |
| Adaptive Protein Tokenizer (APT)token_count=128, learning_the_size=true2026.02 | 1.96 | 0.906 | |
| Foldtoken2026.02 | 2.16 | 0.858 | |
| ESM32026.02 | 2.38 | 0.915 | |
| IST2026.02 | 2.87 | 0.862 | |
| DPLM2026.02 | 4.68 | 0.81 |