Peptide-protein interaction prediction (five-fold cross-validation) benchmark leaderboard · SOTA2 Research

Peptide-protein interaction prediction (five-fold cross-validation)

0.88PrecisionConGA-PepPI

Evaluation Results

Method	Links
ConGA-PepPI2026.04		0.88	0.785	0.682	0.839	0.83	0.921	0.915
IIDL-PepPI2026.04		0.794	0.809	0.614	0.807	0.807	0.889	0.882
CPI2026.04		0.771	0.762	0.51	0.754	0.756	0.843	0.825
CAMP2026.04		0.767	0.775	0.536	0.767	0.769	0.85	0.838
BridgeDPI2026.04		0.761	0.677	0.473	0.733	0.715	0.822	0.807
DeepPepPI2026.04		0.74	0.796	0.519	0.759	0.767	0.835	0.835
RF2026.04		0.739	0.712	0.461	0.73	0.725	0.8	0.817
DeepDTA2026.04		0.728	0.715	0.448	0.723	0.721	0.796	0.777
SVM2026.04		0.725	0.517	0.335	0.66	0.604	0.76	0.773
PIPR2026.04		0.72	0.717	0.439	0.719	0.718	0.788	0.769
XGBoost2026.04		0.718	0.699	0.425	0.712	0.708	0.783	0.797
DrugBAN2026.04		0.65	0.666	0.305	0.651	0.655	0.715	0.701
LR2026.04		0.615	0.563	0.203	0.598	0.579	0.632	0.663