Nuclei Segmentation on TNBC
85.72Dice ScoreUN-SAM
Evaluation Results
| Method | Links | ||||
|---|---|---|---|---|---|
| UN-SAMManual prompt=No, Fine-tuned=Yes2025.08 | 85.72 | 75.02 | 85.81 | — | |
| ViT-AdapterFrozen Params. (M)=-, Seg. Head Params. (M)=133.52, Evaluation Protocol=End-to-end, Input Resolution=5122026.05 | 85.4 | — | — | 83.8 | |
| CMD-LFrozen Params. (M)=602, Seg. Head Params. (M)=7.15, Evaluation Protocol=Fine-tuned (+ SegHead: Fig. B2(A)), Input Resolution=2562026.05 | 85.4 | — | — | 85.1 | |
| CMD-LFrozen Params. (M)=602, Seg. Head Params. (M)=21.21, Evaluation Protocol=Fine-tuned (+ SegHead: Fig. B2(B)), Input Resolution=2562026.05 | 85.4 | — | — | 83 | |
| PromptNucSegManual prompt=No, Fine-tuned=Yes2025.08 | 84.59 | 73.35 | 84.53 | — | |
| H-Optimus-0Frozen Params. (M)=1100, Seg. Head Params. (M)=9.42, Evaluation Protocol=Frozen backbone, Input Resolution=ViT/16: 512; ViT/14: 5042026.05 | 84.3 | — | — | 81.1 | |
| TransUNetFrozen Params. (M)=-, Seg. Head Params. (M)=105.28, Evaluation Protocol=End-to-end, Input Resolution=5122026.05 | 84.3 | — | — | 82.5 | |
| Med-SAManual prompt=Point, Fine-tuned=Yes2025.08 | 84.16 | 72.68 | 84.32 | — | |
| HibouFrozen Params. (M)=304, Seg. Head Params. (M)=7.06, Evaluation Protocol=Frozen backbone, Input Resolution=ViT/16: 512; ViT/14: 5042026.05 | 84.1 | — | — | 82.3 | |
| VirchowFrozen Params. (M)=631, Seg. Head Params. (M)=8.24, Evaluation Protocol=Frozen backbone, Input Resolution=ViT/16: 512; ViT/14: 5042026.05 | 83.9 | — | — | 81.3 | |
| KaikoFrozen Params. (M)=304, Seg. Head Params. (M)=7.06, Evaluation Protocol=Frozen backbone, Input Resolution=ViT/16: 512; ViT/14: 5042026.05 | 83.8 | — | — | 82.2 | |
| Original SAMManual prompt=Point, Fine-tuned=Yes2025.08 | 83.46 | 46.78 | 64.83 | — | |
| H-Optimus-1Frozen Params. (M)=1100, Seg. Head Params. (M)=9.42, Evaluation Protocol=Frozen backbone, Input Resolution=ViT/16: 512; ViT/14: 5042026.05 | 83.3 | — | — | 80.2 | |
| UNI2-hFrozen Params. (M)=681, Seg. Head Params. (M)=9.42, Evaluation Protocol=Frozen backbone, Input Resolution=ViT/16: 512; ViT/14: 5042026.05 | 83.3 | — | — | 80.4 | |
| SAMedManual prompt=Point, Fine-tuned=Yes2025.08 | 83.19 | 71.23 | 83.33 | — | |
| Prov-GigapathFrozen Params. (M)=1100, Seg. Head Params. (M)=9.42, Evaluation Protocol=Frozen backbone, Input Resolution=ViT/16: 512; ViT/14: 5042026.05 | 82.8 | — | — | 80.9 | |
| PhikonFrozen Params. (M)=86.4, Seg. Head Params. (M)=5.88, Evaluation Protocol=Frozen backbone, Input Resolution=ViT/16: 512; ViT/14: 5042026.05 | 82.8 | — | — | 80.4 | |
| CONCHv1.5Frozen Params. (M)=306, Seg. Head Params. (M)=7.06, Evaluation Protocol=Frozen backbone, Input Resolution=ViT/16: 512; ViT/14: 5042026.05 | 82.6 | — | — | 80.6 | |
| Phikon-v2Frozen Params. (M)=303, Seg. Head Params. (M)=7.06, Evaluation Protocol=Frozen backbone, Input Resolution=ViT/16: 512; ViT/14: 5042026.05 | 82.4 | — | — | 79.4 | |
| SAMPOManual prompt=Point, Fine-tuned=No2025.08 | 82.13 | 70.16 | 83.4 | — | |
| nnU-NetManual prompt=No, Fine-tuned=Yes2025.08 | 82.11 | 69.74 | 82.35 | — | |
| Virchow2Frozen Params. (M)=631, Seg. Head Params. (M)=8.24, Evaluation Protocol=Frozen backbone, Input Resolution=ViT/16: 512; ViT/14: 5042026.05 | 82.1 | — | — | 77.8 | |
| UNIFrozen Params. (M)=303, Seg. Head Params. (M)=7.06, Evaluation Protocol=Frozen backbone, Input Resolution=ViT/16: 512; ViT/14: 5042026.05 | 82 | — | — | 78.6 | |
| PathOrchestraFrozen Params. (M)=303, Seg. Head Params. (M)=7.06, Evaluation Protocol=Frozen backbone, Input Resolution=ViT/16: 512; ViT/14: 5042026.05 | 81.9 | — | — | 81 | |
| CONCHFrozen Params. (M)=90.4, Seg. Head Params. (M)=5.88, Evaluation Protocol=Frozen backbone, Input Resolution=ViT/16: 512; ViT/14: 5042026.05 | 81.6 | — | — | 79.3 | |
| Attention-UNetManual prompt=No, Fine-tuned=Yes2025.08 | 81.25 | 68.59 | 81.84 | — | |
| Unet++Manual prompt=No, Fine-tuned=Yes2025.08 | 81.19 | 68.44 | 81.6 | — | |
| SACManual prompt=No, Fine-tuned=Yes2025.08 | 81.18 | 68.38 | 81.65 | — | |
| CellSAMManual prompt=No, Fine-tuned=Yes2025.08 | 81.12 | 66.83 | 81.29 | — | |
| CMD-LFrozen Params. (M)=602, Evaluation Protocol=Linear Probe, Input Resolution=2562026.05 | 80.7 | — | — | 81.3 | |
| U-NetManual prompt=No, Fine-tuned=Yes2025.08 | 80.64 | 67.62 | 81 | — | |
| nnUNetFrozen Params. (M)=-, Seg. Head Params. (M)=12.19, Evaluation Protocol=End-to-end, Input Resolution=5122026.05 | 80.3 | — | — | 75.4 | |
| Midnight-12kFrozen Params. (M)=1100, Seg. Head Params. (M)=9.42, Evaluation Protocol=Frozen backbone, Input Resolution=ViT/16: 512; ViT/14: 5042026.05 | 79.8 | — | — | 77.1 | |
| H-SAMManual prompt=No, Fine-tuned=Yes2025.08 | 79.45 | 65.63 | 79.81 | — | |
| All-in-SAMManual prompt=No, Fine-tuned=Yes2025.08 | 79.25 | 66.14 | 80.62 | — | |
| TransUNetManual prompt=No, Fine-tuned=Yes2025.08 | 78.3 | 64.37 | 77.65 | — | |
| Med-SAManual prompt=No, Fine-tuned=Yes2025.08 | 77.59 | 62.95 | 78.63 | — | |
| SAMedManual prompt=No, Fine-tuned=Yes2025.08 | 75.74 | 61.42 | 75.87 | — | |
| MUSKFrozen Params. (M)=675, Seg. Head Params. (M)=7.06, Evaluation Protocol=Frozen backbone, Input Resolution=ViT/16: 512; ViT/14: 5042026.05 | 69.3 | — | — | 66.8 | |
| VISTAFrozen Params. (M)=168, Seg. Head Params. (M)=Zero-shot, Evaluation Protocol=Zero-shot2026.05 | 55.1 | — | — | 58.4 | |
| SAM2Manual prompt=Point, Fine-tuned=No2025.08 | 42.81 | 29.44 | 43.5 | — | |
| SAM3Manual prompt=Text, Fine-tuned=No2025.08 | 21.59 | 32.63 | 21.82 | — | |
| Original SAMManual prompt=No, Fine-tuned=Yes2025.08 | 20.44 | 12.53 | 35.8 | — |