Nuclei Instance Segmentation on PanNuke
84.22Neoplastic ScoreMCTrans
Evaluation results
| Method | Links | ||||||
|---|---|---|---|---|---|---|---|
| MCTransBackbone=ResNet-34, Params (M)=23.787, Flops (G)=39.712021.06 | 84.22 | 68.21 | 65.04 | 48.3 | 78.7 | 68.9 | |
| MCTransBackbone=VGG-Style, Params (M)=7.642, Flops (G)=18.0652021.06 | 83.99 | 68.24 | 63.95 | 47.39 | 78.42 | 68.4 | |
| CENetBackbone=VGG-Style, Params (M)=17.682, Flops (G)=18.7792021.06 | 83.05 | 66.92 | 62.41 | 38.21 | 76.44 | 65.37 | |
| UNetBackbone=VGG-Style, Params (M)=7.853, Flops (G)=14.0372021.06 | 82.86 | 66.16 | 62.45 | 38.1 | 75.02 | 64.92 | |
| UNetBackbone=ResNet-34, Params (M)=24.563, Flops (G)=38.2572021.06 | 82.85 | 65.48 | 62.29 | 40.11 | 75.57 | 65.26 | |
| AttentionUNetBackbone=ResNet-34, Params (M)=25.094, Flops (G)=40.0652021.06 | 82.74 | 65.42 | 62.09 | 38.6 | 76.02 | 64.97 | |
| CENetBackbone=ResNet-34, Params (M)=34.368, Flops (G)=41.3892021.06 | 82.73 | 68.25 | 63.15 | 41.12 | 77.27 | 66.5 | |
| UNet++Backbone=VGG-Style, Params (M)=9.163, Flops (G)=34.6612021.06 | 82.14 | 66.01 | 61.61 | 38.47 | 76.54 | 64.97 | |
| UNet++Backbone=ResNet-34, Params (M)=25.094, Flops (G)=84.2992021.06 | 82.03 | 67.58 | 62.79 | 40.79 | 77.21 | 66.08 | |
| AttentionUNetBackbone=VGG-Style, Params (M)=8.382, Flops (G)=15.7112021.06 | 81.85 | 65.37 | 63.79 | 38.96 | 75.45 | 64.27 | |
| CellViT-SAM-HDecoder=HV, Hyperparameter=CellViT2023.06 | 58.1 | 41.7 | 42.3 | 14.9 | 58.3 | — | |
| CellViT-SAM-H2024.08 | 58.1 | 41.7 | 42.3 | 14.9 | 58.3 | — | |
| NuLite-HEncoder=FastViT-MA36, Reparameterized=true2024.08 | 57.65 | 41.71 | 41.34 | 14.47 | 57.12 | — | |
| NuLite-MEncoder=FastViT-SA36, Reparameterized=true2024.08 | 57.52 | 43.08 | 40.7 | 13.79 | 56.93 | — | |
| NuLite-TEncoder=FastViT-S12, Reparameterized=true2024.08 | 57.22 | 41.55 | 40.62 | 13.7 | 56.22 | — | |
| TSFD-NetEvaluation Protocol=not evaluated on official three-fold splits2023.06 | 57.2 | 45.3 | 42.3 | 21.4 | 56.6 | — | |
| CellViT-SAM-HDecoder=CPP, Hyperparameter=CellViT2023.06 | 57.1 | 40.5 | 39.5 | 13.1 | 56.5 | — | |
| CellViT256Decoder=HV, Hyperparameter=CellViT2023.06 | 56.7 | 40.5 | 40.5 | 14.4 | 55.9 | — | |
| CellViT256-No-FCDecoder=HV, Hyperparameter=CellViT, Regularization=All except Focal Tversky Loss2023.06 | 56.7 | 41.6 | 40.4 | 14.1 | 54.8 | — | |
| CellViT2562024.08 | 56.7 | 40.5 | 40.5 | 14.4 | 55.9 | — | |
| CellViT256-AugDecoder=HV, Hyperparameter=CellViT, Regularization=Data Augmentation2023.06 | 56.5 | 41.9 | 40.3 | 15.6 | 55.8 | — | |
| STARDIST (RN50)Decoder=SD, Hyperparameter=CPP, Retrained by authors=true2023.06 | 56.4 | 39.8 | 38.8 | 2.4 | 54.3 | — | |
| HoVer-NetDecoder=HV2023.06 | 55.1 | 41.7 | 38.8 | 13.9 | 49.1 | — | |
| HoVer-Net2024.08 | 55.1 | 41.7 | 38.8 | 13.9 | 49.1 | — | |
| CellViT-SAM-HDecoder=SD, Hyperparameter=CellViT2023.06 | 54.8 | 40 | 34.7 | 13.2 | 54.4 | — | |
| STARDIST (RN50)Decoder=SD, Hyperparameter=CellViT, Retrained by authors=true2023.06 | 54.7 | 42.4 | 38 | 12.3 | 53.2 | — | |
| CellViT256Decoder=CPP, Hyperparameter=CellViT2023.06 | 54 | 41.4 | 36.9 | 13.3 | 52.4 | — | |
| CellViT-SAM-HDecoder=HV, Hyperparameter=CellViT, Resolution=0.50 µm/px2023.06 | 52.8 | 31.5 | 31.1 | 3.1 | 50.2 | — | |
| HoVer-UNet2024.08 | 52.4 | 40.1 | 37.9 | 7.6 | 47.8 | — | |
| CellViT256Decoder=SD, Hyperparameter=CellViT2023.06 | 51.6 | 40 | 33.1 | 12.8 | 50.7 | — | |
| Micro-Net2023.06 | 50.4 | 33.3 | 33.4 | 5.1 | 44.2 | — | |
| Micro-Net2024.08 | 50.4 | 33.3 | 33.4 | 5.1 | 44.2 | — | |
| CellViT256Decoder=HV, Hyperparameter=CellViT, Resolution=0.50 µm/px2023.06 | 49.7 | 29.2 | 28.5 | 2.1 | 46.7 | — | |
| CellViT256-RawDecoder=HV, Hyperparameter=CellViT, Regularization=None2023.06 | 49.5 | 34.4 | 33.5 | 6.7 | 46.5 | — | |
| CellViT256-OverDecoder=HV, Hyperparameter=CellViT, Regularization=Oversampling2023.06 | 49.4 | 34.9 | 33.9 | 7.1 | 46.7 | — | |
| Mask-RCNN2023.06 | 47.2 | 29 | 30 | 6.9 | 40.3 | — | |
| Mask-RCNN2024.08 | 47.2 | 29 | 30 | 6.9 | 40.3 | — | |
| DIST2023.06 | 43.9 | 34.3 | 27.5 | 0 | 29 | — | |
| DIST2024.08 | 43.9 | 34.3 | 27.5 | 0 | 29 | — |