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Named Entity Recognition on MIMIC-III (test)

85.6Strict F1Centralized fine-tuning
26.8442.09557.3572.605Jan 29, 2026

Evaluation results

MethodLinks
Centralized fine-tuningBackbone=LLaMA3-8B2026.0185.695.4
Centralized fine-tuningBackbone=DeepSeek-R1-Distill-8B2026.0185.295.2
Fed-MedLoRA+Backbone=LLaMA3-8B2026.018594.9
Fed-MedLoRABackbone=LLaMA3-8B2026.0184.794.2
Fed-MedLoRA+Backbone=DeepSeek-R1-Distill-8B2026.0184.594.5
Fed-MedLoRABackbone=DeepSeek-R1-Distill-8B2026.0184.193.2
LLaMA3-8B CentralizedBackbone=LLaMA3-8B, Strategy=Centralized (Upper bound)2026.018492.5
DeepSeek-R1-Distill-8B CentralizedBackbone=DeepSeek-R1-Distill-8B, Strategy=Centralized (Upper bound)2026.018392.5
Bio_ClinicalBERT CentralizedBackbone=Bio_ClinicalBERT, Strategy=Centralized (Upper bound)2026.018191.9
Fed-MedLoRABackbone=LLaMA3-8B2026.0180.989.3
Centralized fine-tuningBackbone=Bio_ClinicalBERT2026.0180.790.7
Single site fine-tuningBackbone=LLaMA3-8B2026.0180.391.8
Fed-MedLoRA+Backbone=LLaMA3-8B2026.0180.390
Fed-MedLoRA+Backbone=DeepSeek-R1-Distill-8B2026.0180.288.8
Fed-MedLoRABackbone=DeepSeek-R1-Distill-8B2026.0179.986.5
Single site fine-tuningBackbone=DeepSeek-R1-Distill-8B2026.0179.790.2
Bio_ClinicalBERT Single siteBackbone=Bio_ClinicalBERT, Strategy=Single site (Avg, baseline)2026.0178.284.8
DeepSeek-R1-Distill-8B Single siteBackbone=DeepSeek-R1-Distill-8B, Strategy=Single site (Avg, baseline)2026.0177.889.5
LLaMA3-8B Single siteBackbone=LLaMA3-8B, Strategy=Single site (Avg, baseline)2026.0177.587.6
Single site fine-tuningBackbone=Bio_ClinicalBERT2026.0175.386.7
Zero-shotBackbone=GPT-4o2026.0155.681.5
GPT-4o Zero-shotBackbone=GPT-4o, Strategy=Zero-shot (Baseline)2026.0155.681.5
Zero-shotBackbone=LLaMA3-8B2026.0134.550.3
LLaMA3-8B Zero-shotBackbone=LLaMA3-8B, Strategy=Zero-shot (Baseline)2026.0134.550.3
Zero-shotBackbone=DeepSeek-R1-Distill-8B2026.0129.143.8
DeepSeek-R1-Distill-8B Zero-shotBackbone=DeepSeek-R1-Distill-8B, Strategy=Zero-shot (Baseline)2026.0129.143.8