Multi-organ Segmentation on BTCV (test)
97.8SplMedSegDiff-V2
Evaluation results
| Method | Links | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| MedSegDiff-V22023.01 | 97.8 | 94.1 | 96.3 | 84.8 | 81.8 | 98.5 | 94 | 92.8 | 86.9 | 82.3 | 83.1 | — | — | 89.5 | — | 81.7 | — | — | |
| Swin UNETR2021.11 | 97.6 | 95.8 | 95.6 | 89.3 | 87.5 | 98.5 | 95.3 | 94.9 | 90.4 | 89.9 | 89.8 | — | — | 91.8 | — | 84.6 | — | — | |
| MedSegDiff2023.01 | 97.3 | 93 | 95.5 | 81.2 | 81.5 | 97.3 | 92.4 | 90.7 | 86.8 | 82.5 | 78.8 | — | — | 87.9 | — | 77.9 | — | — | |
| UNETR2021.11 | 97.2 | 94.2 | 95.4 | 82.5 | 86.4 | 98.3 | 94.5 | 94.8 | 89 | 85.8 | 85.2 | — | — | 89.1 | — | 81.2 | — | — | |
| Swin-UNetr2023.01 | 97.1 | 93.6 | 94.3 | 79.4 | 77.3 | 97.5 | 92.1 | 89.2 | 85.3 | 81.2 | 79.4 | — | — | 86.9 | — | 76.5 | — | — | |
| UNETR2022.05 | 96.8 | 92.4 | 94.1 | 75 | 76.6 | 97.1 | 91.3 | 89 | 84.7 | — | 76.7 | — | — | 85.6 | — | 74.1 | 78.8 | — | |
| UNetr2023.01 | 96.8 | 92.4 | 94.1 | 75 | 76.6 | 97.1 | 91.3 | 89 | 84.7 | 78.8 | 76.7 | — | — | 85.6 | — | 74.1 | — | — | |
| nnUNet2021.11 | 96.7 | 92.4 | 95.7 | 81.4 | 83.2 | 97.5 | 92.5 | 92.8 | 87 | 83.2 | 84.9 | — | — | 88.8 | — | 78.4 | — | — | |
| SMITInitialization=SSL pre-trained2022.05 | 96.7 | 94.5 | 94.8 | 82.6 | 82.2 | 97.6 | 93.4 | 92.1 | 86.4 | — | 85.1 | — | — | 87.8 | — | 75.4 | 82.7 | — | |
| PaNN2021.11 | 96.6 | 92.7 | 95.2 | 73.2 | 79.1 | 97.3 | 89.1 | 91.4 | 85 | 80.5 | 80.2 | — | — | 85.4 | — | 65.2 | — | — | |
| RandomPatch2021.11 | 96.3 | 91.2 | 92.1 | 74.9 | 76 | 96.2 | 87 | 88.9 | 84.6 | 78.6 | 76.2 | — | — | 84.4 | — | 71.2 | — | — | |
| Rubik++Pre-training protocol=With Medical SSL, re-implemented=true2024.02 | 96.21 | 90.41 | 89.33 | 75.22 | 72.64 | 97.44 | 79.25 | 89.65 | 83.76 | 74.74 | 78.35 | 67.14 | 61.97 | 81.38 | — | — | — | — | |
| nnUNetsource=BTCV leaderboard2025.12 | 95.95 | 88.35 | 93.02 | 70.13 | 76.72 | 96.51 | 86.79 | 88.93 | 82.89 | — | 79.6 | 73.26 | 68.35 | 83.16 | — | — | — | 78.51 | |
| SMITInitialization=random2022.05 | 95.9 | 92.1 | 94.7 | 74.6 | 80.2 | 97.2 | 91.6 | 91.7 | 84.8 | — | 81.7 | — | — | 85 | — | 71.1 | 79.7 | — | |
| CoTr2021.11 | 95.8 | 92.1 | 93.6 | 70 | 76.4 | 96.3 | 85.4 | 92 | 83.8 | 78.7 | 77.5 | — | — | 84.4 | — | 69.4 | — | — | |
| CoTr2022.05 | 95.8 | 92.1 | 93.6 | 70 | 76.4 | 96.3 | 85.4 | 92 | 83.8 | — | 77.5 | — | — | 84.4 | — | 69.4 | 78.7 | — | |
| PCRLv1Pre-training protocol=With Medical SSL, re-implemented=true2024.02 | 95.73 | 89.66 | 88.53 | 75.41 | 72.33 | 96.2 | 78.99 | 89.11 | 83.06 | 74.47 | 77.88 | 67.02 | 61.85 | 80.78 | — | — | — | — | |
| VoCoPre-training protocol=With Medical SSL2024.02 | 95.73 | 96.53 | 94.48 | 76.02 | 75.6 | 97.41 | 78.43 | 91.21 | 86.12 | 78.19 | 80.88 | 71.47 | 67.88 | 83.85 | — | — | — | — | |
| SwinUNETR-RHsource=BTCV leaderboard2025.12 | 95.58 | 94.02 | 94.33 | 61.65 | 72.08 | 96.59 | 80.38 | 89.46 | 83.43 | — | 78.29 | 70.36 | 65.45 | 81.01 | — | — | — | 71.55 | |
| SimMIMPre-training protocol=With General SSL2024.02 | 95.56 | 95.82 | 94.14 | 52.06 | 53.52 | 98.98 | 80.25 | 88.11 | 82.98 | 66.49 | 69.16 | 60.88 | 50.45 | 76.03 | — | — | — | — | |
| PCRLv2Pre-training protocol=With Medical SSL, re-implemented=true2024.02 | 95.5 | 91.43 | 89.52 | 76.15 | 73.54 | 97.28 | 79.64 | 90.16 | 84.17 | 75.2 | 78.71 | 68.74 | 62.93 | 81.74 | — | — | — | — | |
| SegDiff2023.01 | 95.4 | 93.2 | 92.6 | 73.8 | 76.3 | 95.3 | 92.7 | 84.6 | 83.3 | 79.6 | 78.2 | — | — | 84.7 | — | 72.3 | — | — | |
| GVSLPre-training protocol=With Medical SSL, re-implemented=true2024.02 | 95.27 | 91.22 | 92.25 | 72.69 | 73.56 | 96.44 | 82.4 | 88.9 | 84.22 | 70.84 | 76.42 | 67.48 | 63.25 | 81.87 | — | — | — | — | |
| Swin-UNETRPre-training protocol=With Medical SSL2024.02 | 95.25 | 93.16 | 92.97 | 63.62 | 73.96 | 96.21 | 79.32 | 89.98 | 83.19 | 76.11 | 82.25 | 68.99 | 65.11 | 81.54 | — | — | — | — | |
| TransUNet2021.11 | 95.2 | 92.7 | 92.9 | 66.2 | 75.7 | 96.9 | 88.9 | 92 | 83.3 | 79.1 | 77.5 | — | — | 83.8 | — | 63.7 | — | — | |
| TrsUnet2022.05 | 95.2 | 92.7 | 92.9 | 66.2 | 75.7 | 96.9 | 88.9 | 92 | 83.3 | — | 77.5 | — | — | 83.8 | — | 63.7 | 79.1 | — | |
| TransUNet2023.01 | 95.2 | 92.7 | 92.9 | 66.2 | 75.7 | 96.9 | 88.9 | 92 | 83.3 | 79.1 | 77.5 | — | — | 83.8 | — | 63.7 | — | — | |
| UNETR++source=BTCV leaderboard2025.12 | 94.94 | 91.9 | 93.62 | 70.75 | 77.18 | 95.95 | 85.15 | 89.28 | 83.14 | — | 77.42 | 72.56 | 68.17 | 83.28 | — | — | — | 76.91 | |
| JigsawPre-training protocol=With General SSL, re-implemented=true2024.02 | 94.62 | 93.41 | 93.55 | 75.63 | 73.21 | 95.71 | 80.8 | 89.41 | 84.78 | 71.02 | 79.57 | 65.68 | 60.22 | 81.35 | — | — | — | — | |
| Swin-UNETRsource=BTCV leaderboard2025.12 | 94.59 | 88.97 | 92.39 | 65.37 | 75.43 | 95.61 | 75.57 | 88.28 | 81.61 | — | 74.52 | 68.23 | 66.02 | 80.44 | — | — | — | 76.3 | |
| nnFormersource=BTCV leaderboard2025.12 | 94.58 | 88.62 | 93.68 | 65.29 | 76.22 | 96.17 | 83.59 | 89.09 | 80.8 | — | 77.87 | 70.2 | 66.05 | 81.62 | — | — | — | 75.97 | |
| TransBTSsource=BTCV leaderboard2025.12 | 94.55 | 89.2 | 90.97 | 68.38 | 75.61 | 96.44 | 83.52 | 88.55 | 82.48 | — | 76.02 | 67.23 | 67.03 | 81.31 | — | — | — | 74.21 | |
| GL-MAEPre-training protocol=With Medical SSL2024.02 | 94.54 | 94.39 | 94.37 | 73.19 | 74.93 | 96.51 | 83.49 | 89.74 | 83.11 | 70.8 | 75.71 | 69.39 | 63.12 | 82.01 | — | — | — | — | |
| PositionLabelPre-training protocol=With General SSL, re-implemented=true2024.02 | 94.35 | 93.15 | 93.21 | 75.39 | 73.24 | 95.76 | 80.69 | 88.8 | 84.04 | 71.18 | 79.02 | 65.11 | 60.07 | 81.09 | — | — | — | — | |
| SwinMMPre-training protocol=With Medical SSL2024.02 | 94.33 | 94.18 | 94.16 | 72.97 | 74.75 | 96.37 | 83.23 | 89.56 | 82.91 | 70.65 | 75.52 | 69.17 | 62.9 | 81.81 | — | — | — | — | |
| CoTr*2021.11 | 94.3 | 92.4 | 92.9 | 68.7 | 76.2 | 96.2 | 89.4 | 91.4 | 83.8 | 79.6 | 78.3 | — | — | 84.1 | — | 64.7 | — | — | |
| nnUnet2022.05 | 94.2 | 89.4 | 91 | 70.4 | 72.3 | 94.8 | 82.4 | 87.7 | 78.2 | — | 68 | — | — | 80.2 | — | 61.6 | 72 | — | |
| nnUNet2023.01 | 94.2 | 89.4 | 91 | 70.4 | 72.3 | 94.8 | 82.4 | 87.7 | 78.2 | 72 | 68 | — | — | 80.2 | — | 61.6 | — | — | |
| Swin-UNETRPre-training protocol=From Scratch, re-implemented=true2024.02 | 94.06 | 93.54 | 93.8 | 65.51 | 74.6 | 97.09 | 75.94 | 91.8 | 82.36 | 73.63 | 75.19 | 68 | 61.11 | 80.53 | — | — | — | — | |
| MAE3DPre-training protocol=With General SSL2024.02 | 93.98 | 94.37 | 94.18 | 69.86 | 74.65 | 96.66 | 80.4 | 90.3 | 83.13 | 72.65 | 77.11 | 67.34 | 60.54 | 81.33 | — | — | — | — | |
| EnsDiff2023.01 | 93.8 | 93.1 | 92.4 | 77.2 | 77.1 | 96.7 | 91 | 86.9 | 85.1 | 80.2 | 77.1 | — | — | 85.4 | — | 74.5 | — | — | |
| ASPP2021.11 | 93.5 | 89.2 | 91.4 | 68.9 | 76 | 95.3 | 81.2 | 91.8 | 80.7 | 69.5 | 72 | — | — | 81.1 | — | 62.9 | — | — | |
| ASPP2022.05 | 93.5 | 89.2 | 91.4 | 68.9 | 76 | 95.3 | 81.2 | 91.8 | 80.7 | — | 72 | — | — | 81.1 | — | 62.9 | 69.5 | — | |
| SETR NUP2021.11 | 93.1 | 89 | 89.7 | 65.2 | 76 | 95.2 | 80.9 | 86.7 | 74.5 | 71.7 | 71.9 | — | — | 79.6 | — | 62 | — | — | |
| UNETRPre-training protocol=From Scratch2024.02 | 93.02 | 94.13 | 94.12 | 66.99 | 70.87 | 96.11 | 77.27 | 89.22 | 82.1 | 70.16 | 76.65 | 65.32 | 59.21 | 79.82 | — | — | — | — | |
| SETR MLA2021.11 | 93 | 88.9 | 89.4 | 65 | 76.2 | 95.3 | 81.9 | 87.2 | 73.9 | 72 | 71.6 | — | — | 79.6 | — | 61.4 | — | — | |
| SETR PUP2021.11 | 92.9 | 89.3 | 89.2 | 64.9 | 76.4 | 95.4 | 82.2 | 86.9 | 74.2 | 71.5 | 71.4 | — | — | 79.7 | — | 61.8 | — | — | |
| Anchor2023.01 | 92.8 | 88.2 | 87.3 | 65.2 | 75 | 95.1 | 82.9 | 85.5 | 73.1 | 71.4 | 68.3 | — | — | 78.7 | — | 60.2 | — | — | |
| SimCLRPre-training protocol=With General SSL2024.02 | 92.79 | 93.04 | 91.41 | 49.65 | 50.99 | 98.49 | 77.92 | 85.56 | 80.58 | 64.37 | 67.16 | 59.04 | 48.99 | 73.85 | — | — | — | — | |
| MGPre-training protocol=With Medical SSL2024.02 | 91.99 | 93.52 | 91.81 | 65.11 | 76.14 | 95.98 | 86.88 | 89.29 | 83.59 | 71.79 | 81.62 | 67.97 | 63.18 | 81.45 | — | — | — | — | |
| MoCo v3Pre-training protocol=With General SSL, re-implemented=true2024.02 | 91.96 | 92.85 | 92.42 | 68.25 | 72.77 | 94.91 | 78.82 | 88.21 | 81.59 | 71.15 | 75.76 | 66.48 | 58.81 | 79.54 | — | — | — | — | |
| ROTPre-training protocol=With Medical SSL2024.02 | 91.75 | 93.13 | 91.62 | 65.09 | 76.55 | 94.21 | 86.16 | 89.74 | 83.08 | 71.13 | 81.55 | 67.9 | 63.72 | 81.2 | — | — | — | — | |
| MedSegDiff +TransUNet2023.01 | 91.2 | 87.6 | 84.6 | 64.5 | 71.8 | 94.7 | 82.4 | 87.6 | 71.5 | 77.5 | 67.2 | — | — | 78.5 | — | 61.8 | — | — | |
| UNETRsource=BTCV leaderboard2025.12 | 90.48 | 82.51 | 86.05 | 58.23 | 71.21 | 94.64 | 72.06 | 86.57 | 76.51 | — | 66.06 | 66.25 | 63.04 | 76 | — | — | — | 70.37 | |
| VicreglPre-training protocol=With Medical SSL2024.02 | 90.32 | 94.15 | 91.3 | 65.12 | 75.41 | 94.76 | 86 | 89.13 | 82.54 | 71.26 | 81.01 | 67.66 | 63.08 | 80.89 | — | — | — | — | |
| SwinUNETRSource=Drawn from previous papers2024.02 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 84.72 | — | — | — | |
| VoCo2024.02 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 86.44 | — | — | — |