Ligand Binding Affinity Prediction on PDBbind LBA (test)
1.321RMSEProNet-Backbone+SCHull
Evaluation results
| Method | Links | ||||
|---|---|---|---|---|---|
| ProNet-Backbone+SCHullAvg. Time=34.42026.06 | 1.321 | 0.581 | 0.578 | 0.535 | |
| SSProNet-Amino-AcidAvg. Time=47.32026.06 | 1.354 | 0.607 | 0.601 | 0.487 | |
| ProNet-Amino–Acid+SCHullAvg. Time=33.92026.06 | 1.355 | 0.556 | 0.568 | 0.512 | |
| SSProNet-BackboneAvg. Time=54.72026.06 | 1.382 | 0.613 | 0.616 | 0.498 | |
| GVP-GNN + SCHullAvg. Time=53.62026.06 | 1.401 | 0.475 | 0.459 | 0.335 | |
| ProNet-Amino–AcidAvg. Time=31.72026.06 | 1.455 | 0.536 | 0.526 | 0.465 | |
| ProNet-BackboneAvg. Time=32.12026.06 | 1.458 | 0.546 | 0.55 | 0.481 | |
| HoloProt-Full Surface2026.06 | 1.464 | 0.509 | 0.5 | — | |
| HoloProt-Superpixel2026.06 | 1.491 | 0.491 | 0.482 | — | |
| GVP-GNNAvg. Time=48.62026.06 | 1.529 | 0.441 | 0.432 | 0.301 | |
| IEConv2026.06 | 1.554 | 0.414 | 0.428 | — |