In-silico single-gene perturbation on Heart cell atlas (236 fetal cardiomyocyte transcriptomes)
9.45pHK (Direct)TEDDY-G 400M
Evaluation results
| Method | Links | ||||
|---|---|---|---|---|---|
| TEDDY-G 400Mmode=zero-shot, assay=GATA4 knockout2025.03 | 9.45 | 6.47 | 1.66 | 1.27 | |
| Geneformer (base)mode=zero-shot, assay=GATA4 knockout2025.03 | 5.01 | 4.59 | 2.22 | 0.98 | |
| Geneformer 12-layermode=zero-shot, assay=GATA4 knockout2025.03 | 1.43 | 7.72 | 9.26 | 0.96 | |
| scGPTmode=zero-shot, assay=GATA4 knockout2025.03 | 0.75 | 0.2 | 0.32 | 0.99 | |
| Nicheformermode=zero-shot, assay=GATA4 knockout2025.03 | 0.72 | 2.62 | 9.21 | 1 |