Hit Identification on KDR-Hi Lo-Hi benchmark
70.1AUPRCHyformer
Evaluation results
| Method | Links | |
|---|---|---|
| HyformerTraining Strategy=Joint pre-training2025.04 | 70.1 | |
| Chemprop2025.04 | 67.6 | |
| HyformerTraining Strategy=no-joint (MLM loss only)2025.04 | 67.5 | |
| KNNMolecular Descriptor=ECFP42025.04 | 64.6 | |
| MLPMolecular Descriptor=ECFP42025.04 | 62.6 | |
| MLPMolecular Descriptor=MACCS2025.04 | 61.3 | |
| SVMMolecular Descriptor=ECFP42025.04 | 61.1 | |
| KNNMolecular Descriptor=MACCS2025.04 | 61 | |
| Dummy baseline2025.04 | 60.9 | |
| GBMolecular Descriptor=ECFP42025.04 | 60.7 | |
| SVMMolecular Descriptor=MACCS2025.04 | 60.5 | |
| GBMolecular Descriptor=MACCS2025.04 | 60.3 |