Graph Classification on Peptides-func (test)
72.07APSchrödinger
Evaluation Results
| Method | Links | |
|---|---|---|
| Schrödinger2026.05 | 72.07 | |
| Lie UniGCN2026.05 | 71.73 | |
| DRew2026.05 | 71.5 | |
| CRAWL2026.05 | 70.74 | |
| UniGCN2026.05 | 70.72 | |
| GRITParameters=~500K2023.05 | 69.88 | |
| GRIT2024.02 | 69.88 | |
| GRIT2026.05 | 69.88 | |
| Graph ViT2026.05 | 69.42 | |
| S-CGIBDomain Adaptation=true2024.12 | 69.4 | |
| GPS+GFSEBackbone=GPS, Structural Encoding=GFSE2025.04 | 68.74 | |
| GCN2026.05 | 68.6 | |
| GUMP2026.05 | 68.43 | |
| MGT + WavePENo. Params=499k2023.02 | 68.17 | |
| GatedGCN2026.05 | 67.65 | |
| MGT + LapPENo. Params=499k2023.02 | 67.28 | |
| MGT + RWPENo. Params=499k2023.02 | 67.09 | |
| GPS+GPSEBackbone=GPS, Structural Encoding=GPSE2025.04 | 66.88 | |
| TIGT2024.02 | 66.79 | |
| TF+GFSEBackbone=Transformer, Structural Encoding=GFSE2025.04 | 66.42 | |
| GINE2026.05 | 66.21 | |
| GPS+RWSEBackbone=GPS, Structural Encoding=RWSE2025.04 | 66.03 | |
| S-CGIBDomain Adaptation=false2024.12 | 65.8 | |
| CIN++2023.06 | 65.69 | |
| SAN + RWPENo. Params=500k2023.02 | 65.62 | |
| TransformerComplexity=O(N^2), Positional Encoding=Baseline2025.09 | 65.4 | |
| GPSParameters=~500K2023.05 | 65.35 | |
| GPS2024.02 | 65.35 | |
| GPSBackbone=GPS, Structural Encoding=None2025.04 | 65.35 | |
| TF+GPSEBackbone=Transformer, Structural Encoding=GPSE2025.04 | 65.34 | |
| GPS2026.05 | 65.34 | |
| Exphormer2026.05 | 65.27 | |
| GPS+LapPEBackbone=GPS, Structural Encoding=LapPE2025.04 | 64.94 | |
| WIREModel Architecture=Performer, Complexity=O(N)2025.09 | 64.9 | |
| PerformerComplexity=O(N), Positional Encoding=Baseline2025.09 | 64.4 | |
| SANEncoding=RWSE2023.06 | 64.39 | |
| SAN+RWSEParameters=~500K2023.05 | 64.39 | |
| SANencoding=RWSE2024.02 | 64.39 | |
| SANEncoding=LapPE2023.06 | 63.84 | |
| SAN + LapPENo. Params=493k2023.02 | 63.84 | |
| SAN+LapPEParameters=~500K2023.05 | 63.84 | |
| SANencoding=LapPE2024.02 | 63.84 | |
| TransformerEncoding=LapPE2023.06 | 63.26 | |
| Transformer + LapPENo. Params=488k2023.02 | 63.26 | |
| Transformer+LapPEParameters=~500K2023.05 | 63.26 | |
| Transformerencoding=LapPE2024.02 | 63.26 | |
| TF+RWSEBackbone=Transformer, Structural Encoding=RWSE2025.04 | 63.26 | |
| TF+LapPEBackbone=Transformer, Structural Encoding=LapPE2025.04 | 63.07 | |
| GraphFPCF2023.10 | 62.67 | |
| GraphFP2024.12 | 61.8 | |
| GCN+GFSEBackbone=GCN, Structural Encoding=GFSE2025.04 | 61.31 | |
| SimSGT2024.12 | 61.2 | |
| GatedGCNEncoding=RWSE2023.06 | 60.69 | |
| GatedGCN + RWPENo. Params=506k2023.02 | 60.69 | |
| GatedGCN+RWSEParameters=~500K2023.05 | 60.69 | |
| GatedGCN+RWSEstructural encoding=RWSE2023.10 | 60.69 | |
| GatedGCNencoding=RWSE2024.02 | 60.69 | |
| GCN+LapPEBackbone=GCN, Structural Encoding=LapPE2025.04 | 60.21 | |
| GCN+GPSEBackbone=GCN, Structural Encoding=GPSE2025.04 | 59.59 | |
| GCN2023.06 | 59.3 | |
| GCNNo. Params=508k2023.02 | 59.3 | |
| GCNParameters=~500K2023.05 | 59.3 | |
| GCN2023.10 | 59.3 | |
| GCN2024.02 | 59.3 | |
| GCNBackbone=GCN, Structural Encoding=None2025.04 | 59.3 | |
| GROVE2024.12 | 58.7 | |
| GatedGCN2023.06 | 58.64 | |
| GatedGCNNo. Params=509k2023.02 | 58.64 | |
| GatedGCNParameters=~500K2023.05 | 58.64 | |
| GatedGCN2023.10 | 58.64 | |
| GatedGCN2024.02 | 58.64 | |
| MoAMa2024.12 | 58.4 | |
| GCN+RWSEBackbone=GCN, Structural Encoding=RWSE2025.04 | 58.27 | |
| GCNII2023.06 | 55.43 | |
| GCNII2023.10 | 55.43 | |
| GIN+GFSEBackbone=GIN, Structural Encoding=GFSE2025.04 | 55.32 | |
| GINE2023.06 | 54.98 | |
| GINENo. Params=476k2023.02 | 54.98 | |
| GINEParameters=~500K2023.05 | 54.98 | |
| GIN2023.10 | 54.98 | |
| GINE2024.02 | 54.98 | |
| GINBackbone=GIN, Structural Encoding=None2025.04 | 54.98 | |
| MGSSL2024.12 | 54.1 | |
| GIN+RWSEBackbone=GIN, Structural Encoding=RWSE2025.04 | 54.1 | |
| GIN+GPSEBackbone=GIN, Structural Encoding=GPSE2025.04 | 53.89 | |
| GIN+LapPEBackbone=GIN, Structural Encoding=LapPE2025.04 | 53.23 | |
| Cy2C-GNNs2024.02 | 51.93 | |
| MICRO-Graph2024.12 | 50.5 | |
| TransformerBackbone=Transformer, Structural Encoding=None2025.04 | 48 | |
| MLP2023.06 | 40.6 | |
| JOAOv22024.12 | 39.8 | |
| JOAO2024.12 | 38.6 | |
| GraphCL2024.12 | 38 | |
| Infomax2024.12 | 33.5 | |
| AttrMasking2024.12 | 31.8 | |
| GraphLoG2024.12 | 31.3 | |
| ContextPred2024.12 | 31.1 | |
| EdgePred2024.12 | 31 |