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ResearchFormerly WizWand

Genetic perturbation representation learning on HEPG2 cell line

38.63Average ScoreTxFM-B
18.92224.038529.15534.2715May 29, 2026
Updated 5mo ago

Evaluation results

MethodLinks
TxFM-Btrain data=DiverseRNA, # samples=1.4M2026.0538.63
Ridge PCAtrain data=DiverseRNA, # samples=1.4M2026.0536.76
Linear autoencodertrain data=DiverseRNA, # samples=1.4M2026.0535.44
TxFM-Btrain data=TF-Sapiens, # samples=57M2026.0535.3
STATE-SEtrain data=Tahoe+atlases, # samples=170M2026.0535.1
(Lib+Log)Norm+1k HVGtrain data=evaluation data2026.0534.65
AIDO.Cell-100Mtrain data=Atlases, # samples=50M2026.0534.52
Cell2Sentencetrain data=Web text+atlases, # samples=50M2026.0534.49
(Lib+Log)Normtrain data=n/a2026.0534.12
PCAtrain data=DiverseRNA, # samples=1.4M2026.0534
scVI-Ltrain data=DiverseRNA, # samples=1.4M2026.0532.69
(Lib+Log)Norm+5k HVGtrain data=evaluation data2026.0531.88
TranscriptFormer-Sapienstrain data=TF-Sapiens, # samples=57M2026.0531.55
Tahoe-x1-70Mtrain data=Tahoe+atlases, # samples=266M2026.0531.36
Raw datatrain data=n/a2026.0530.81
scGPTtrain data=Atlases, # samples=33M2026.0529.35
scCellotrain data=Atlases, # samples=22M2026.0528.5
UCEtrain data=Atlases, # samples=36M2026.0526.92
scTabtrain data=Atlases, # samples=22M2026.0525.91
CellPLMtrain data=Tumor atlases, # samples=11M2026.0525.25
scPrint-Ltrain data=Atlases, # samples=50M2026.0523.8
GeneJEPAtrain data=Tahoe, # samples=100M2026.0523.64
Geneformer-v2train data=Genecorpus, # samples=104M2026.0519.89
random label shuffletrain data=n/a2026.0519.68