Entity-centric retrieval on HPO-5k seed=0
81.6Hits@1Euclidean text retrieval
Evaluation Results
| Method | Links | ||||
|---|---|---|---|---|---|
| Euclidean text retrievalEncoder=S-BioBERT, Indexing=one synonym per entity2026.01 | 81.6 | 96.9 | 86.9 | 100 | |
| HyEm (soft mix)Encoder=S-BioBERT, Indexing=one synonym per entity2026.01 | 73.6 | 95.2 | 81.5 | 93.9 | |
| Euclidean KG embeddingEncoder=S-BioBERT, Indexing=one synonym per entity2026.01 | 0.9 | 4.8 | 2.1 | 2.4 | |
| Hyperbolic (no radius ctrl)Encoder=S-BioBERT, Indexing=one synonym per entity2026.01 | 0.9 | 4.8 | 2 | 2.3 | |
| HyEm (no gate)Encoder=S-BioBERT, Indexing=one synonym per entity2026.01 | 0.9 | 4.5 | 1.6 | 1.9 |