drug-induced gene expression prediction on Real VCPI THP-1 drug-seq (scaffold-split)
0.11Proxy wMSERidge (fingerprints)
Evaluation results
| Method | Links | ||
|---|---|---|---|
| Ridge (fingerprints)Class=linear2026.06 | 0.11 | 51.26 | |
| Deep MLP (chemistry only)Class=deep2026.06 | 0.1113 | 49.77 | |
| Fusion (Stage C)Class=deep+retrieval2026.06 | 0.1123 | 50.08 | |
| Ridge (descriptors)Class=linear2026.06 | 0.1128 | 51.09 | |
| Mean responseClass=baseline2026.06 | 0.1155 | 53.9 | |
| Retrieval (Stage B)Class=retrieval2026.06 | 0.1166 | 51.05 |