De novo small molecule generation on SAFE (test)
99.9ValidityLFlexMDM
Evaluation Results
| Method | Links | ||||
|---|---|---|---|---|---|
| LFlexMDMbum=frozen, bin=trainable, conf.=true, p=0.2, Aux. Size=small, Sampling steps=10242026.02 | 99.9 | 0.83 | 79.1 | 50.1 | |
| LFlexMDMbum=frozen, bin=trainable, conf.=true, p=0.2, Aux. Size=xtiny, Sampling steps=10242026.02 | 99.9 | 0.834 | 80.5 | 56.6 | |
| LFlexMDMbum=frozen, bin=trainable, conf.=true, p=0.2, Aux. Size=medium, Sampling steps=10242026.02 | 99.8 | 0.857 | 86.1 | 59.2 | |
| LFlexMDMbum=frozen, bin=trainable, conf.=false, p=0.2, Aux. Size=xtiny, Sampling steps=10242026.02 | 99.8 | 0.876 | 90.3 | 58.9 | |
| LFlexMDMbum=frozen, bin=trainable, conf.=true, p=0.5, Aux. Size=medium, Sampling steps=10242026.02 | 99.7 | 0.87 | 88.6 | 54.7 | |
| LFlexMDMbum=frozen, bin=trainable, conf.=true, p=0.5, Aux. Size=small, Sampling steps=10242026.02 | 99.7 | 0.837 | 82.6 | 52.4 | |
| LFlexMDMbum=frozen, bin=trainable, conf.=true, p=0.5, Aux. Size=xtiny, Sampling steps=10242026.02 | 99.7 | 0.851 | 87.8 | 60 | |
| LFlexMDMbum=frozen, bin=trainable, conf.=false, p=0.5, Aux. Size=xtiny, Sampling steps=10242026.02 | 99.7 | 0.881 | 93.8 | 57.5 | |
| LFlexMDMbum=frozen, bin=trainable, conf.=false, p=0.2, Aux. Size=medium, Sampling steps=10242026.02 | 99.6 | 0.887 | 90.9 | 46.8 | |
| LFlexMDMbum=frozen, bin=trainable, conf.=false, p=0.5, Aux. Size=small, Sampling steps=10242026.02 | 99.6 | 0.878 | 92.2 | 61.2 | |
| LFlexMDMbum=frozen, bin=trainable, conf.=false, p=0.2, Aux. Size=small, Sampling steps=10242026.02 | 99.5 | 0.864 | 87.2 | 62.1 | |
| LFlexMDMbum=frozen, bin=trainable, conf.=true, p=1, Aux. Size=xtiny, Sampling steps=10242026.02 | 99.4 | 0.919 | 96.3 | 43.1 | |
| LFlexMDMbum=frozen, bin=trainable, conf.=false, p=0.5, Aux. Size=medium, Sampling steps=10242026.02 | 99.3 | 0.889 | 93 | 46.9 | |
| LFlexMDMbum=frozen, bin=trainable, conf.=false, p=1, Aux. Size=medium, Sampling steps=10242026.02 | 99 | 0.921 | 96.1 | 39.1 | |
| LFlexMDMbum=frozen, bin=trainable, conf.=true, p=1, Aux. Size=small, Sampling steps=10242026.02 | 99 | 0.919 | 95.9 | 43.8 | |
| LFlexMDMbum=frozen, bin=trainable, conf.=false, p=1, Aux. Size=xtiny, Sampling steps=10242026.02 | 99 | 0.918 | 97.1 | 43 | |
| FlexMDMbum=frozen, bin=frozen, conf.=false, Sampling steps=10242026.02 | 98.9 | 0.922 | 96.4 | 39.5 | |
| LFlexMDMbum=frozen, bin=trainable, conf.=true, p=1, Aux. Size=medium, Sampling steps=10242026.02 | 98.9 | 0.921 | 95.6 | 39.6 | |
| LFlexMDMbum=frozen, bin=trainable, conf.=false, p=1, Aux. Size=small, Sampling steps=10242026.02 | 98.9 | 0.918 | 96.4 | 43.5 | |
| MDM2026.02 | 96.7 | 0.896 | 99.3 | 53.8 | |
| SAFE-GPT2026.02 | 94 | 0.879 | 100 | 54.7 | |
| FlexMDMbum=frozen, bin=trainable, conf.=true, Sampling steps=10242026.02 | 86.5 | 0.906 | 20.2 | 5.8 |