Clustering on E. coli
0.72ARISPOREANN
Evaluation results
| Method | Links | ||
|---|---|---|---|
| SPOREANNN=336, D=7, D'=72025.10 | 0.72 | 0.68 | |
| SPOREENNN=336, D=7, D'=72025.10 | 0.72 | 0.68 | |
| HDBSCAN*k=4, Cluster Selection Strategy=EOM, Persistence Measure=N/A, Dimensionality Reduction (UMAP)=min(50, D)2025.12 | 0.69 | — | |
| HypeGBMS2025.12 | 0.673 | 0.635 | |
| GBMS2025.12 | 0.669 | 0.631 | |
| GMS2025.12 | 0.661 | 0.626 | |
| GMM2025.12 | 0.637 | 0.614 | |
| PLSCANk=4, Cluster Selection Strategy=Top-5 most persistent layer, Persistence Measure=size-lambda, Dimensionality Reduction (UMAP)=min(50, D)2025.12 | 0.63 | — | |
| PLSCANk=4, Cluster Selection Strategy=Top-5 most persistent layer, Persistence Measure=lambda, Dimensionality Reduction (UMAP)=min(50, D)2025.12 | 0.63 | — | |
| GMMN=336, D=7, D'=72025.10 | 0.63 | 0.61 | |
| PLSCANk=4, Cluster Selection Strategy=Top-5 most persistent layer, Persistence Measure=size, Dimensionality Reduction (UMAP)=min(50, D)2025.12 | 0.49 | — | |
| Gridshift2025.12 | 0.484 | 0.515 | |
| HDBSCANN=336, D=7, D'=72025.10 | 0.45 | 0.47 | |
| DBSCAN2025.12 | 0.435 | 0.437 | |
| HSFC2025.12 | 0.431 | 0.565 | |
| KMeansN=336, D=7, D'=72025.10 | 0.43 | 0.59 | |
| SpectralN=336, D=7, D'=72025.10 | 0.41 | 0.61 | |
| Spectral2025.12 | 0.391 | 0.592 | |
| k-means2025.12 | 0.384 | 0.534 | |
| QuickMeanShift2025.12 | 0.354 | 0.513 | |
| PLSCANk=4, Cluster Selection Strategy=Top-5 most persistent layer, Persistence Measure=size-d, Dimensionality Reduction (UMAP)=min(50, D)2025.12 | 0.34 | — | |
| PLSCANk=4, Cluster Selection Strategy=Top-5 most persistent layer, Persistence Measure=d, Dimensionality Reduction (UMAP)=min(50, D)2025.12 | 0.34 | — | |
| HDBSCAN*k=4, Cluster Selection Strategy=leaf, Persistence Measure=N/A, Dimensionality Reduction (UMAP)=min(50, D)2025.12 | 0.15 | — | |
| WBMS2025.12 | 0.038 | 0.112 |